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  5. Cba_g10573

Cba_g10573


Description : platform ATPase CDC48 & original description: none


Gene families : OG0000324 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000324_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Cba_g10573

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00154p00076410 CDC48B,... Cell division control protein 48 homolog B... 0.02 OrthoFinder output from all 47 species
Ala_g37022 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Cba_g16600 emb1354, CDC48C platform ATPase CDC48 & original description: none 0.04 OrthoFinder output from all 47 species
Cre06.g269950 No alias Cell division control protein 48 homolog E... 0.02 OrthoFinder output from all 47 species
Dde_g22951 No alias platform ATPase CDC48 & original description: none 0.03 OrthoFinder output from all 47 species
Ehy_g07885 No alias platform ATPase CDC48 & original description: none 0.02 OrthoFinder output from all 47 species
LOC_Os08g31870.1 LOC_Os08g31870 platform ATPase (CDC48) 0.02 OrthoFinder output from all 47 species
Lfl_g28208 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
MA_686028g0010 CDC48A, CDC48, ATCDC48 Cell division control protein 48 homolog D... 0.02 OrthoFinder output from all 47 species
Pp3c12_11370V3.1 Pp3c12_11370 AAA-type ATPase family protein 0.02 OrthoFinder output from all 47 species
Zm00001e022374_P001 Zm00001e022374 Cell division control protein 48 homolog D... 0.02 OrthoFinder output from all 47 species
Zm00001e022375_P001 Zm00001e022375 Cell division cycle protein 48 homolog OS=Glycine max... 0.03 OrthoFinder output from all 47 species
Zm00001e025331_P002 emb1354, CDC48C,... Cell division control protein 48 homolog C... 0.02 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0005524 ATP binding IEA Interproscan
MF GO:0016887 ATP hydrolysis activity IEA Interproscan
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Type GO Term Name Evidence Source
BP GO:0006486 protein glycosylation IEP HCCA
MF GO:0008417 fucosyltransferase activity IEP HCCA
MF GO:0016757 glycosyltransferase activity IEP HCCA
MF GO:0016758 hexosyltransferase activity IEP HCCA
BP GO:0036211 protein modification process IEP HCCA
BP GO:0043412 macromolecule modification IEP HCCA
BP GO:0043413 macromolecule glycosylation IEP HCCA
BP GO:0070085 glycosylation IEP HCCA
InterPro domains Description Start Stop
IPR003959 ATPase_AAA_core 522 655
IPR003959 ATPase_AAA_core 249 378
IPR004201 Cdc48_dom2 135 198
IPR003338 CDC4_N-term_subdom 34 115
IPR041569 AAA_lid_3 401 443
IPR041569 AAA_lid_3 677 718
No external refs found!