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  5. Cba_g10248

Cba_g10248


Description : methylation reader *(MBD10-11) & original description: none


Gene families : OG0000919 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000919_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Cba_g10248

Target Alias Description ECC score Gene Family Method Actions
Adi_g022931 MBD10 methylation reader *(MBD10-11) & original description: none 0.03 OrthoFinder output from all 47 species
Adi_g058503 No alias methylation reader *(MBD10-11) & original description: none 0.02 OrthoFinder output from all 47 species
Adi_g060317 MBD10 methylation reader *(MBD10-11) & original description: none 0.02 OrthoFinder output from all 47 species
Als_g08851 MBD10 methylation reader *(MBD10-11) & original description: none 0.02 OrthoFinder output from all 47 species
Als_g15836 No alias methylation reader *(MBD10-11) & original description: none 0.03 OrthoFinder output from all 47 species
Aop_g04420 No alias methylation reader *(MBD10-11) & original description: none 0.03 OrthoFinder output from all 47 species
Dac_g00453 No alias methylation reader *(MBD10-11) & original description: none 0.03 OrthoFinder output from all 47 species
Ehy_g07494 MBD11, ATMBD11 methylation reader *(MBD10-11) & original description: none 0.03 OrthoFinder output from all 47 species
Pir_g11641 No alias methylation reader *(MBD10-11) & original description: none 0.03 OrthoFinder output from all 47 species
Pir_g35278 No alias not classified & original description: none 0.01 OrthoFinder output from all 47 species
Ppi_g03856 MBD10 methylation reader *(MBD10-11) & original description: none 0.03 OrthoFinder output from all 47 species
Ppi_g04437 No alias methylation reader *(MBD10-11) & original description: none 0.03 OrthoFinder output from all 47 species
Solyc12g009590.2.1 MBD11, ATMBD11,... methylation reader (MBD10-11) 0.03 OrthoFinder output from all 47 species
Spa_g12685 MBD11, ATMBD11 methylation reader *(MBD10-11) & original description: none 0.02 OrthoFinder output from all 47 species
Tin_g30246 MBD11, ATMBD11 methylation reader *(MBD10-11) & original description: none 0.02 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0003677 DNA binding IEA Interproscan
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Type GO Term Name Evidence Source
MF GO:0004386 helicase activity IEP HCCA
MF GO:0004842 ubiquitin-protein transferase activity IEP HCCA
MF GO:0005515 protein binding IEP HCCA
MF GO:0005543 phospholipid binding IEP HCCA
CC GO:0005634 nucleus IEP HCCA
BP GO:0006259 DNA metabolic process IEP HCCA
BP GO:0006281 DNA repair IEP HCCA
BP GO:0006284 base-excision repair IEP HCCA
BP GO:0006950 response to stress IEP HCCA
BP GO:0006974 cellular response to DNA damage stimulus IEP HCCA
MF GO:0008289 lipid binding IEP HCCA
MF GO:0016887 ATP hydrolysis activity IEP HCCA
MF GO:0019787 ubiquitin-like protein transferase activity IEP HCCA
BP GO:0033554 cellular response to stress IEP HCCA
MF GO:0035091 phosphatidylinositol binding IEP HCCA
BP GO:0051716 cellular response to stimulus IEP HCCA
InterPro domains Description Start Stop
IPR001739 Methyl_CpG_DNA-bd 19 83
No external refs found!