Cba_g09705 (ATPCNA1, PCNA1)

Aliases : ATPCNA1, PCNA1

Description : sliding clamp protein *(PCNA) & original description: none

Gene families : OG0002250 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0002250_tree

Sequence : coding (download), protein (download)

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	HRR: Cba_g09705
Cluster	HCCA: Cluster_6

Target	Alias	Description	ECC score	Gene Family Method
AT1G07370	ATPCNA1, PCNA1	proliferating cellular nuclear antigen 1	0.03	OrthoFinder output from all 47 species
Ala_g05666	ATPCNA1, PCNA1	sliding clamp protein *(PCNA) & original description: none	0.04	OrthoFinder output from all 47 species
Als_g07143	ATPCNA1, PCNA1	sliding clamp protein *(PCNA) & original description: none	0.04	OrthoFinder output from all 47 species
Als_g50349	ATPCNA1, PCNA1	sliding clamp protein *(PCNA) & original description: none	0.04	OrthoFinder output from all 47 species
Aspi01Gene47926.t1	ATPCNA1, PCNA1,...	sliding clamp protein *(PCNA) & original description: none	0.04	OrthoFinder output from all 47 species
Ceric.21G042200.1	ATPCNA1, PCNA1,...	sliding clamp protein *(PCNA) & original description:...	0.03	OrthoFinder output from all 47 species
Ceric.32G019600.1	ATPCNA1, PCNA1,...	not classified & original description: pacid=50597498...	0.02	OrthoFinder output from all 47 species
Cre12.g515850	ATPCNA1, PCNA1	Cell cycle.interphase.DNA...	0.03	OrthoFinder output from all 47 species
Dac_g03057	ATPCNA1, PCNA1	sliding clamp protein *(PCNA) & original description: none	0.03	OrthoFinder output from all 47 species
GSVIVT01024815001	PCNA2, ATPCNA2	Cell cycle.interphase.DNA...	0.05	OrthoFinder output from all 47 species
Gb_11143	ATPCNA1, PCNA1	sliding clamp protein (PCNA)	0.03	OrthoFinder output from all 47 species
Len_g11664	ATPCNA1, PCNA1	sliding clamp protein *(PCNA) & original description: none	0.05	OrthoFinder output from all 47 species
MA_83835g0010	ATPCNA1, PCNA1	sliding clamp protein (PCNA)	0.03	OrthoFinder output from all 47 species
Mp5g08780.1	ATPCNA1, PCNA1	sliding clamp protein (PCNA)	0.03	OrthoFinder output from all 47 species
Msp_g09130	ATPCNA1, PCNA1	sliding clamp protein *(PCNA) & original description: none	0.06	OrthoFinder output from all 47 species
Nbi_g07886	ATPCNA1, PCNA1	sliding clamp protein *(PCNA) & original description: none	0.02	OrthoFinder output from all 47 species
Pp3c4_11630V3.1	ATPCNA1, PCNA1,...	proliferating cellular nuclear antigen 1	0.02	OrthoFinder output from all 47 species
Solyc06g076660.3.1	PCNA2, ATPCNA2,...	sliding clamp protein (PCNA)	0.02	OrthoFinder output from all 47 species
Spa_g12144	ATPCNA1, PCNA1	sliding clamp protein *(PCNA) & original description: none	0.06	OrthoFinder output from all 47 species
Spa_g12145	ATPCNA1, PCNA1	sliding clamp protein *(PCNA) & original description: none	0.03	OrthoFinder output from all 47 species
Spa_g51877	ATPCNA1, PCNA1	sliding clamp protein *(PCNA) & original description: none	0.05	OrthoFinder output from all 47 species
Tin_g12734	ATPCNA1, PCNA1	sliding clamp protein *(PCNA) & original description: none	0.03	OrthoFinder output from all 47 species
Zm00001e016159_P001	PCNA2, ATPCNA2,...	sliding clamp protein (PCNA)	0.02	OrthoFinder output from all 47 species
Zm00001e023660_P001	PCNA2, ATPCNA2,...	sliding clamp protein (PCNA)	0.02	OrthoFinder output from all 47 species

Type	GO Term	Name	Evidence	Source
MF	GO:0003674	molecular_function	None	Extended
MF	GO:0003676	nucleic acid binding	None	Extended
MF	GO:0003677	DNA binding	IEA	Interproscan
MF	GO:0005488	binding	None	Extended
BP	GO:0006275	regulation of DNA replication	IEA	Interproscan
BP	GO:0008150	biological_process	None	Extended
BP	GO:0019219	regulation of nucleobase-containing compound metabolic process	None	Extended
BP	GO:0019222	regulation of metabolic process	None	Extended
BP	GO:0031323	regulation of cellular metabolic process	None	Extended
BP	GO:0050789	regulation of biological process	None	Extended
BP	GO:0050794	regulation of cellular process	None	Extended
BP	GO:0051052	regulation of DNA metabolic process	None	Extended
BP	GO:0051171	regulation of nitrogen compound metabolic process	None	Extended
BP	GO:0060255	regulation of macromolecule metabolic process	None	Extended
BP	GO:0065007	biological regulation	None	Extended
BP	GO:0080090	regulation of primary metabolic process	None	Extended
MF	GO:0097159	organic cyclic compound binding	None	Extended
MF	GO:1901363	heterocyclic compound binding	None	Extended

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Type	GO Term	Name	Evidence	Source
MF	GO:0004097	catechol oxidase activity	IEP	HCCA
MF	GO:0004497	monooxygenase activity	IEP	HCCA
BP	GO:0006950	response to stress	IEP	HCCA
BP	GO:0006952	defense response	IEP	HCCA
MF	GO:0016679	oxidoreductase activity, acting on diphenols and related substances as donors	IEP	HCCA
MF	GO:0016682	oxidoreductase activity, acting on diphenols and related substances as donors, oxygen as acceptor	IEP	HCCA

InterPro domains	Description	Start	Stop
IPR022648	Pr_cel_nuc_antig_N	1	125
IPR022649	Pr_cel_nuc_antig_C	127	254

External Links

No external refs found!

Cba_g09705 (ATPCNA1, PCNA1)

Expression Profile

Co-expression Networks

Expression Context Conservation (ECC)

Functional Annotation