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  5. Cba_g09677

Cba_g09677


Description : not classified & original description: none


Gene families : OG0003280 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0003280_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Cba_g09677
Cluster HCCA: Cluster_49

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00109p00146830 NDF4,... Photosynthesis.photophosphorylation.chlororespiration.NAD... 0.03 OrthoFinder output from all 47 species
AT3G16250 NDF4 NDH-dependent cyclic electron flow 1 0.04 OrthoFinder output from all 47 species
Aev_g18850 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Ala_g11649 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Als_g12699 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Azfi_s0007.g011196 No alias not classified & original description: CDS=130-699 0.03 OrthoFinder output from all 47 species
Ceric.08G016600.1 Ceric.08G016600 not classified & original description: pacid=50638657... 0.03 OrthoFinder output from all 47 species
Dac_g21543 No alias not classified & original description: none 0.06 OrthoFinder output from all 47 species
Dcu_g02362 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Dcu_g19341 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Ehy_g00345 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
GSVIVT01017041001 NDF4 Photosynthesis.photophosphorylation.chlororespiration.NAD... 0.05 OrthoFinder output from all 47 species
GSVIVT01035716001 No alias Photosynthetic NDH subunit of subcomplex B 3,... 0.02 OrthoFinder output from all 47 species
Gb_23465 No alias Photosynthetic NDH subunit of subcomplex B 3,... 0.04 OrthoFinder output from all 47 species
Lfl_g13755 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Nbi_g43838 No alias not classified & original description: none 0.06 OrthoFinder output from all 47 species
Ore_g28145 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ppi_g01758 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Sacu_v1.1_s0005.g002590 No alias not classified & original description: CDS=71-655 0.04 OrthoFinder output from all 47 species
Zm00001e032359_P001 Zm00001e032359 Photosynthetic NDH subunit of subcomplex B 3,... 0.03 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0051536 iron-sulfur cluster binding IEA Interproscan
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Type GO Term Name Evidence Source
MF GO:0000287 magnesium ion binding IEP HCCA
MF GO:0004427 inorganic diphosphate phosphatase activity IEP HCCA
CC GO:0005737 cytoplasm IEP HCCA
BP GO:0006364 rRNA processing IEP HCCA
BP GO:0006396 RNA processing IEP HCCA
BP GO:0016072 rRNA metabolic process IEP HCCA
BP GO:0034470 ncRNA processing IEP HCCA
BP GO:0034660 ncRNA metabolic process IEP HCCA
MF GO:0051287 NAD binding IEP HCCA
InterPro domains Description Start Stop
IPR001041 2Fe-2S_ferredoxin-type 143 196
No external refs found!