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  5. Cba_g09676

Cba_g09676


Description : component *(eL20) of large ribosomal-subunit (LSU) proteome & original description: none


Gene families : OG0001533 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0001533_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Cba_g09676

Target Alias Description ECC score Gene Family Method Actions
Als_g19389 No alias component *(eL20) of large ribosomal-subunit (LSU)... 0.03 OrthoFinder output from all 47 species
Aob_g37546 No alias component *(eL20) of large ribosomal-subunit (LSU)... 0.02 OrthoFinder output from all 47 species
Aop_g54401 No alias component *(eL20) of large ribosomal-subunit (LSU)... 0.03 OrthoFinder output from all 47 species
Cpa|evm.model.tig00000615.59 No alias Protein biosynthesis.cytosolic ribosome.large subunit... 0.01 OrthoFinder output from all 47 species
Dcu_g42842 No alias component *(eL20) of large ribosomal-subunit (LSU)... 0.03 OrthoFinder output from all 47 species
Msp_g09599 No alias component *(eL20) of large ribosomal-subunit (LSU)... 0.03 OrthoFinder output from all 47 species
Zm00001e020218_P001 Zm00001e020218 component RPL18a of LSU proteome component 0.03 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0003735 structural constituent of ribosome IEA Interproscan
CC GO:0005840 ribosome IEA Interproscan
BP GO:0006412 translation IEA Interproscan
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Type GO Term Name Evidence Source
BP GO:0001522 pseudouridine synthesis IEP HCCA
MF GO:0004601 peroxidase activity IEP HCCA
MF GO:0004602 glutathione peroxidase activity IEP HCCA
MF GO:0005215 transporter activity IEP HCCA
BP GO:0006950 response to stress IEP HCCA
BP GO:0006979 response to oxidative stress IEP HCCA
BP GO:0009451 RNA modification IEP HCCA
MF GO:0009982 pseudouridine synthase activity IEP HCCA
BP GO:0016070 RNA metabolic process IEP HCCA
MF GO:0016209 antioxidant activity IEP HCCA
MF GO:0016684 oxidoreductase activity, acting on peroxide as acceptor IEP HCCA
MF GO:0016853 isomerase activity IEP HCCA
MF GO:0016866 intramolecular transferase activity IEP HCCA
MF GO:0022857 transmembrane transporter activity IEP HCCA
MF GO:0035673 oligopeptide transmembrane transporter activity IEP HCCA
MF GO:0042887 amide transmembrane transporter activity IEP HCCA
BP GO:0050896 response to stimulus IEP HCCA
MF GO:1904680 peptide transmembrane transporter activity IEP HCCA
InterPro domains Description Start Stop
IPR023573 Ribosomal_L18a//L18Ae/LX 7 128
No external refs found!