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  5. Lfl_g31627

Lfl_g31627 (ATRAB7B, RAB7B,...)


Aliases : ATRAB7B, RAB7B, ATRABG3F, RAB71, RABG3F

Description : not classified & original description: none


Gene families : OG0000865 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000865_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Lfl_g31627
Cluster HCCA: Cluster_112

Target Alias Description ECC score Gene Family Method Actions
AT1G22740 ATRABG3B,... RAB GTPase homolog G3B 0.03 OrthoFinder output from all 47 species
Aop_g18004 ATRABG2, ATRAB7A, RAB7A not classified & original description: none 0.02 OrthoFinder output from all 47 species
LOC_Os05g44050.1 ATRAB7B, RAB7B,... G-class RAB GTPase 0.02 OrthoFinder output from all 47 species
MA_84159g0010 AtRABG3d, RABG3d G-class RAB GTPase 0.02 OrthoFinder output from all 47 species
Zm00001e032146_P002 ATRAB7B, RAB7B,... G-class RAB GTPase 0.02 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0003924 GTPase activity IEA Interproscan
MF GO:0005525 GTP binding IEA Interproscan
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Type GO Term Name Evidence Source
BP GO:0000160 phosphorelay signal transduction system IEP HCCA
BP GO:0006631 fatty acid metabolic process IEP HCCA
MF GO:0008199 ferric iron binding IEP HCCA
MF GO:0016717 oxidoreductase activity, acting on paired donors, with oxidation of a pair of donors resulting in the reduction of molecular oxygen to two molecules of water IEP HCCA
BP GO:0035556 intracellular signal transduction IEP HCCA
MF GO:0045300 acyl-[acyl-carrier-protein] desaturase activity IEP HCCA
InterPro domains Description Start Stop
IPR001806 Small_GTPase 12 102
No external refs found!