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  5. Cba_g08444

Cba_g08444


Description : solute transporter *(MTCC) & original description: none


Gene families : OG0000387 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000387_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Cba_g08444

Target Alias Description ECC score Gene Family Method Actions
AT3G08580 AAC1 ADP/ATP carrier 1 0.02 OrthoFinder output from all 47 species
Adi_g059935 ATAAC3, AAC3 solute transporter *(MTCC) & original description: none 0.03 OrthoFinder output from all 47 species
Adi_g111398 No alias solute transporter *(MTCC) & original description: none 0.03 OrthoFinder output from all 47 species
Aev_g06622 ATAAC3, AAC3 solute transporter *(MTCC) & original description: none 0.02 OrthoFinder output from all 47 species
Cba_g05098 ATAAC3, AAC3 solute transporter *(MTCC) & original description: none 0.05 OrthoFinder output from all 47 species
Cre09.g386650 ATAAC3, AAC3 Solute transport.carrier-mediated transport.MC-type... 0.01 OrthoFinder output from all 47 species
LOC_Os05g23720.1 ATAAC3, AAC3,... solute transporter (MTCC) 0.02 OrthoFinder output from all 47 species
Mp5g16750.1 ATAAC3, AAC3 solute transporter (MTCC) 0.03 OrthoFinder output from all 47 species
Sam_g20034 No alias solute transporter *(MTCC) & original description: none 0.02 OrthoFinder output from all 47 species
Sam_g27844 No alias solute transporter *(MTCC) & original description: none 0.02 OrthoFinder output from all 47 species
Solyc11g062190.2.1 AAC2, Solyc11g062190 solute transporter (MTCC) 0.03 OrthoFinder output from all 47 species
Tin_g03230 ATAAC3, AAC3 solute transporter *(MTCC) & original description: none 0.04 OrthoFinder output from all 47 species
Tin_g12725 ATAAC3, AAC3 solute transporter *(MTCC) & original description: none 0.03 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0003676 nucleic acid binding IEP HCCA
MF GO:0004842 ubiquitin-protein transferase activity IEP HCCA
CC GO:0005634 nucleus IEP HCCA
BP GO:0016567 protein ubiquitination IEP HCCA
MF GO:0019787 ubiquitin-like protein transferase activity IEP HCCA
BP GO:0032446 protein modification by small protein conjugation IEP HCCA
CC GO:0043227 membrane-bounded organelle IEP HCCA
CC GO:0043231 intracellular membrane-bounded organelle IEP HCCA
BP GO:0070647 protein modification by small protein conjugation or removal IEP HCCA
InterPro domains Description Start Stop
IPR018108 Mitochondrial_sb/sol_carrier 148 245
IPR018108 Mitochondrial_sb/sol_carrier 257 348
IPR018108 Mitochondrial_sb/sol_carrier 351 440
No external refs found!