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Cba_g08367 (ATNAP1, ATABC1, ABC1, LAF6)


Aliases : ATNAP1, ATABC1, ABC1, LAF6

Description : component *(SUF-B) of plastidial SUF system assembly phase & original description: none


Gene families : OG0003465 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0003465_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Cba_g08367
Cluster HCCA: Cluster_220

Target Alias Description ECC score Gene Family Method Actions
Ala_g02055 ATNAP1, ATABC1,... component *(SUF-B) of plastidial SUF system assembly... 0.04 OrthoFinder output from all 47 species
Als_g33257 ATNAP1, ATABC1,... component *(SUF-B) of plastidial SUF system assembly... 0.04 OrthoFinder output from all 47 species
Ceric.24G058200.1 ATNAP1, ATABC1,... component *(SUF-B) of plastidial SUF system assembly... 0.04 OrthoFinder output from all 47 species
Cre15.g643600 ATNAP1, ATABC1,... Coenzyme metabolism.iron-sulfur cluster assembly... 0.03 OrthoFinder output from all 47 species
Dac_g07409 ATNAP1, ATABC1,... component *(SUF-B) of plastidial SUF system assembly... 0.06 OrthoFinder output from all 47 species
GSVIVT01012742001 ATNAP1, ATABC1,... UPF0051 protein ABCI8, chloroplastic OS=Arabidopsis thaliana 0.03 OrthoFinder output from all 47 species
Len_g24438 ATNAP1, ATABC1,... component *(SUF-B) of plastidial SUF system assembly... 0.03 OrthoFinder output from all 47 species
Nbi_g00957 ATNAP1, ATABC1,... component *(SUF-B) of plastidial SUF system assembly... 0.05 OrthoFinder output from all 47 species
Ore_g09293 ATNAP1, ATABC1,... component *(SUF-B) of plastidial SUF system assembly... 0.03 OrthoFinder output from all 47 species
Solyc03g031700.4.1 ATNAP1, ATABC1,... component SUF-B of plastidial SUF system assembly phase 0.03 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
BP GO:0016226 iron-sulfur cluster assembly IEA Interproscan
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Type GO Term Name Evidence Source
MF GO:0004356 glutamate-ammonia ligase activity IEP HCCA
BP GO:0006082 organic acid metabolic process IEP HCCA
BP GO:0006520 amino acid metabolic process IEP HCCA
BP GO:0006541 glutamine metabolic process IEP HCCA
BP GO:0006542 glutamine biosynthetic process IEP HCCA
BP GO:0008652 amino acid biosynthetic process IEP HCCA
BP GO:0009064 glutamine family amino acid metabolic process IEP HCCA
BP GO:0009084 glutamine family amino acid biosynthetic process IEP HCCA
BP GO:0016053 organic acid biosynthetic process IEP HCCA
MF GO:0016211 ammonia ligase activity IEP HCCA
MF GO:0016874 ligase activity IEP HCCA
MF GO:0016879 ligase activity, forming carbon-nitrogen bonds IEP HCCA
MF GO:0016880 acid-ammonia (or amide) ligase activity IEP HCCA
BP GO:0019752 carboxylic acid metabolic process IEP HCCA
BP GO:0043436 oxoacid metabolic process IEP HCCA
BP GO:0044283 small molecule biosynthetic process IEP HCCA
BP GO:0046394 carboxylic acid biosynthetic process IEP HCCA
BP GO:1901605 alpha-amino acid metabolic process IEP HCCA
BP GO:1901607 alpha-amino acid biosynthetic process IEP HCCA
InterPro domains Description Start Stop
IPR045595 SufBD_N 208 273
IPR000825 SUF_FeS_clus_asmbl_SufBD 291 524
No external refs found!