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  5. Cba_g08152

Cba_g08152


Description : not classified & original description: none


Gene families : OG0002683 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0002683_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Cba_g08152
Cluster HCCA: Cluster_250

Target Alias Description ECC score Gene Family Method Actions
AT3G58720 No alias RING/U-box superfamily protein 0.06 OrthoFinder output from all 47 species
Adi_g007489 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Adi_g104052 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Aev_g09746 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aev_g18694 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aop_g06895 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Ceric.35G047800.1 Ceric.35G047800 not classified & original description: pacid=50581496... 0.04 OrthoFinder output from all 47 species
Dac_g08538 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Dcu_g15806 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Dcu_g37405 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Dde_g15875 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Ehy_g19569 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
GSVIVT01020763001 No alias Protein degradation.peptide tagging.Ubiquitin... 0.02 OrthoFinder output from all 47 species
GSVIVT01020764001 No alias Protein degradation.peptide tagging.Ubiquitin... 0.03 OrthoFinder output from all 47 species
GSVIVT01020765001 No alias Protein degradation.peptide tagging.Ubiquitin... 0.03 OrthoFinder output from all 47 species
Lfl_g00773 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Lfl_g04479 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
MA_5409604g0010 No alias no hits & (original description: none) 0.02 OrthoFinder output from all 47 species
Ore_g20068 No alias not classified & original description: none 0.01 OrthoFinder output from all 47 species
Solyc07g055330.3.1 Solyc07g055330 no hits & (original description: none) 0.05 OrthoFinder output from all 47 species
Spa_g10051 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Spa_g48655 No alias not classified & original description: none 0.06 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
BP GO:0000160 phosphorelay signal transduction system IEP HCCA
MF GO:0003924 GTPase activity IEP HCCA
MF GO:0004435 phosphatidylinositol phospholipase C activity IEP HCCA
MF GO:0004620 phospholipase activity IEP HCCA
MF GO:0004629 phospholipase C activity IEP HCCA
MF GO:0005488 binding IEP HCCA
MF GO:0005525 GTP binding IEP HCCA
BP GO:0007165 signal transduction IEP HCCA
MF GO:0008081 phosphoric diester hydrolase activity IEP HCCA
MF GO:0016298 lipase activity IEP HCCA
MF GO:0016462 pyrophosphatase activity IEP HCCA
MF GO:0016787 hydrolase activity IEP HCCA
MF GO:0016817 hydrolase activity, acting on acid anhydrides IEP HCCA
MF GO:0016818 hydrolase activity, acting on acid anhydrides, in phosphorus-containing anhydrides IEP HCCA
MF GO:0017111 ribonucleoside triphosphate phosphatase activity IEP HCCA
MF GO:0019001 guanyl nucleotide binding IEP HCCA
MF GO:0030246 carbohydrate binding IEP HCCA
MF GO:0032555 purine ribonucleotide binding IEP HCCA
MF GO:0032561 guanyl ribonucleotide binding IEP HCCA
BP GO:0035556 intracellular signal transduction IEP HCCA
MF GO:0035639 purine ribonucleoside triphosphate binding IEP HCCA
MF GO:0042578 phosphoric ester hydrolase activity IEP HCCA
MF GO:0043167 ion binding IEP HCCA
InterPro domains Description Start Stop
IPR001841 Znf_RING 65 108
No external refs found!