1. Home
  2. Species
  3. Cibotium barometz
  4. Sequence
  5. Cba_g08146

Cba_g08146 (AFB2)


Aliases : AFB2

Description : substrate adaptor of SCF E3 ubiquitin ligase *(TIR1/AFB) & original description: none


Gene families : OG0000211 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000211_tree

Sequence : coding (download), protein (download)


Download

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Cba_g08146

Target Alias Description ECC score Gene Family Method Actions
Aob_g42812 COI1 component *(COI) of jasmonic acid receptor complex &... 0.02 OrthoFinder output from all 47 species
Ceric.11G069800.1 COI1, Ceric.11G069800 component *(COI) of jasmonic acid receptor complex &... 0.03 OrthoFinder output from all 47 species
GSVIVT01000962001 AFB3 Protein AUXIN SIGNALING F-BOX 2 OS=Arabidopsis thaliana 0.03 OrthoFinder output from all 47 species
MA_27909g0020 AFB2 no hits & (original description: none) 0.03 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0005515 protein binding IEA Interproscan
Toggle parental
Type GO Term Name Evidence Source
MF GO:0004852 uroporphyrinogen-III synthase activity IEP HCCA
MF GO:0016835 carbon-oxygen lyase activity IEP HCCA
MF GO:0016836 hydro-lyase activity IEP HCCA
BP GO:0033013 tetrapyrrole metabolic process IEP HCCA
BP GO:0033014 tetrapyrrole biosynthetic process IEP HCCA
InterPro domains Description Start Stop
IPR041567 COI1_F-box 59 97
IPR001611 Leu-rich_rpt 531 550
IPR001611 Leu-rich_rpt 205 225
IPR041101 Transp_inhibit 117 163
No external refs found!