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  5. Cba_g07763

Cba_g07763


Description : not classified & original description: none


Gene families : OG0014343 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0014343_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Cba_g07763

Target Alias Description ECC score Gene Family Method Actions
Ala_g34327 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aop_g69458 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Dcu_g07760 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Dde_g24125 VAC1, ECB2, ATECB2 not classified & original description: none 0.02 OrthoFinder output from all 47 species
Nbi_g23535 No alias not classified & original description: none 0.06 OrthoFinder output from all 47 species
Ppi_g14137 CRR22 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Spa_g22021 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Tin_g23330 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
CC GO:0005643 nuclear pore IEP HCCA
BP GO:0006405 RNA export from nucleus IEP HCCA
BP GO:0006406 mRNA export from nucleus IEP HCCA
BP GO:0006913 nucleocytoplasmic transport IEP HCCA
BP GO:0015931 nucleobase-containing compound transport IEP HCCA
BP GO:0016973 poly(A)+ mRNA export from nucleus IEP HCCA
BP GO:0046907 intracellular transport IEP HCCA
BP GO:0050657 nucleic acid transport IEP HCCA
BP GO:0050658 RNA transport IEP HCCA
BP GO:0051028 mRNA transport IEP HCCA
BP GO:0051168 nuclear export IEP HCCA
BP GO:0051169 nuclear transport IEP HCCA
BP GO:0051236 establishment of RNA localization IEP HCCA
BP GO:0051641 cellular localization IEP HCCA
BP GO:0051649 establishment of localization in cell IEP HCCA
BP GO:0071702 organic substance transport IEP HCCA
BP GO:0071705 nitrogen compound transport IEP HCCA
CC GO:0140513 nuclear protein-containing complex IEP HCCA
InterPro domains Description Start Stop
IPR046848 E_motif 840 901
IPR002885 Pentatricopeptide_repeat 621 668
IPR002885 Pentatricopeptide_repeat 144 193
IPR002885 Pentatricopeptide_repeat 723 770
IPR002885 Pentatricopeptide_repeat 246 291
IPR002885 Pentatricopeptide_repeat 485 533
IPR002885 Pentatricopeptide_repeat 320 345
IPR002885 Pentatricopeptide_repeat 799 822
IPR002885 Pentatricopeptide_repeat 453 482
IPR002885 Pentatricopeptide_repeat 559 582
IPR002885 Pentatricopeptide_repeat 422 450
IPR002885 Pentatricopeptide_repeat 589 616
IPR002885 Pentatricopeptide_repeat 695 722
IPR002885 Pentatricopeptide_repeat 218 240
No external refs found!