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  5. Cba_g07624

Cba_g07624


Description : associated component *(HDC1) of histone deacetylase machineries & original description: none


Gene families : OG0004198 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0004198_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Cba_g07624

Target Alias Description ECC score Gene Family Method Actions
Lfl_g10369 No alias associated component *(HDC1) of histone deacetylase... 0.02 OrthoFinder output from all 47 species
Nbi_g03166 No alias associated component *(HDC1) of histone deacetylase... 0.02 OrthoFinder output from all 47 species
Ore_g06630 No alias associated component *(HDC1) of histone deacetylase... 0.02 OrthoFinder output from all 47 species
Ppi_g03202 No alias associated component *(HDC1) of histone deacetylase... 0.02 OrthoFinder output from all 47 species
Zm00001e010714_P003 Zm00001e010714 associated component HDC1/Rxt3 of histone deacetylase machineries 0.02 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
BP GO:0016575 histone deacetylation IEA Interproscan
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Type GO Term Name Evidence Source
MF GO:0020037 heme binding IEP HCCA
MF GO:0046906 tetrapyrrole binding IEP HCCA
MF GO:0051536 iron-sulfur cluster binding IEP HCCA
MF GO:0051540 metal cluster binding IEP HCCA
InterPro domains Description Start Stop
IPR013951 Rxt3 565 607
No external refs found!