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  5. Cba_g07480

Cba_g07480


Description : putative silicon efflux transporter *(LSI2) & original description: none


Gene families : OG0000879 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000879_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Cba_g07480

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00168p00064780 evm_27.TU.AmTr_v1... No description available 0.02 OrthoFinder output from all 47 species
AMTR_s00168p00065430 evm_27.TU.AmTr_v1... Solute transport.carrier-mediated transport.IT... 0.02 OrthoFinder output from all 47 species
Adi_g020566 No alias putative silicon efflux transporter *(LSI2) & original... 0.04 OrthoFinder output from all 47 species
Ala_g28215 No alias putative silicon efflux transporter *(LSI2) & original... 0.04 OrthoFinder output from all 47 species
Aob_g26379 No alias putative silicon efflux transporter *(LSI2) & original... 0.02 OrthoFinder output from all 47 species
Aop_g18611 No alias putative silicon efflux transporter *(LSI2) & original... 0.04 OrthoFinder output from all 47 species
Aspi01Gene32908.t1 Aspi01Gene32908 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Cba_g32803 No alias putative silicon efflux transporter *(LSI2) & original... 0.02 OrthoFinder output from all 47 species
Dcu_g41359 No alias putative silicon efflux transporter *(LSI2) & original... 0.03 OrthoFinder output from all 47 species
GSVIVT01028896001 No alias Solute transport.carrier-mediated transport.IT... 0.02 OrthoFinder output from all 47 species
Gb_28693 No alias putative silicon efflux transporter (LSI2) 0.02 OrthoFinder output from all 47 species
LOC_Os03g01700.1 LOC_Os03g01700 putative silicon efflux transporter (LSI2) 0.02 OrthoFinder output from all 47 species
LOC_Os10g31040.3 LOC_Os10g31040 putative silicon efflux transporter (LSI2) 0.02 OrthoFinder output from all 47 species
MA_10430496g0010 No alias putative silicon efflux transporter (LSI2) 0.01 OrthoFinder output from all 47 species
Msp_g32066 No alias putative silicon efflux transporter *(LSI2) & original... 0.03 OrthoFinder output from all 47 species
Sam_g06643 No alias putative silicon efflux transporter *(LSI2) & original... 0.01 OrthoFinder output from all 47 species
Smo148775 No alias Solute transport.carrier-mediated transport.IT... 0.03 OrthoFinder output from all 47 species
Solyc03g025350.3.1 Solyc03g025350 putative silicon efflux transporter (LSI2) 0.02 OrthoFinder output from all 47 species
Solyc06g036100.3.1 Solyc06g036100 putative silicon efflux transporter (LSI2) 0.01 OrthoFinder output from all 47 species
Spa_g47300 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Spa_g47898 No alias putative silicon efflux transporter *(LSI2) & original... 0.03 OrthoFinder output from all 47 species
Spa_g56209 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Tin_g02811 No alias putative silicon efflux transporter *(LSI2) & original... 0.03 OrthoFinder output from all 47 species
Zm00001e000055_P001 Zm00001e000055 putative silicon efflux transporter (LSI2) 0.02 OrthoFinder output from all 47 species
Zm00001e000381_P001 Zm00001e000381 putative silicon efflux transporter (LSI2) 0.01 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
CC GO:0016020 membrane IEA Interproscan
BP GO:0055085 transmembrane transport IEA Interproscan
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Type GO Term Name Evidence Source
CC GO:0005694 chromosome IEP HCCA
MF GO:0050660 flavin adenine dinucleotide binding IEP HCCA
InterPro domains Description Start Stop
IPR004680 Cit_transptr-like_dom 24 411
No external refs found!