Cba_g07357


Description : not classified & original description: none


Gene families : OG0000000 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): No tree available for this family

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Cba_g07357

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00022p00156450 REME1,... Pentatricopeptide repeat-containing protein At2g03880,... 0.03 OrthoFinder output from all 47 species
AMTR_s00031p00067070 emb1899, EMB175, EMB166 Pentatricopeptide repeat-containing protein At5g03800... 0.03 OrthoFinder output from all 47 species
AT5G48910 LPA66 Pentatricopeptide repeat (PPR) superfamily protein 0.03 OrthoFinder output from all 47 species
Adi_g067253 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Adi_g085223 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aev_g15170 No alias ssDNA-binding protein *(OSB) & original description: none 0.04 OrthoFinder output from all 47 species
Aev_g21644 OSB1 ssDNA-binding protein *(OSB) & original description: none 0.04 OrthoFinder output from all 47 species
Aev_g36051 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Ala_g06301 CRR22 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ala_g13233 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Als_g27512 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Aob_g09026 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Aob_g26993 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Aob_g31582 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Aop_g09708 EMB2758 not classified & original description: none 0.04 OrthoFinder output from all 47 species
Aop_g36381 OSB1 ssDNA-binding protein *(OSB) & original description: none 0.04 OrthoFinder output from all 47 species
Aop_g68468 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Aspi01Gene02568.t1 Aspi01Gene02568 ssDNA-binding protein *(OSB) & original description: none 0.02 OrthoFinder output from all 47 species
Aspi01Gene04185.t1 Aspi01Gene04185 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aspi01Gene09924.t1 REME1, Aspi01Gene09924 not classified & original description: none 0.07 OrthoFinder output from all 47 species
Aspi01Gene14838.t1 Aspi01Gene14838 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aspi01Gene25075.t1 Aspi01Gene25075 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aspi01Gene35085.t1 Aspi01Gene35085 ssDNA-binding protein *(OSB) & original description: none 0.02 OrthoFinder output from all 47 species
Aspi01Gene43552.t1 Aspi01Gene43552 not classified & original description: none 0.02 OrthoFinder output from all 47 species
Azfi_s0068.g036353 No alias not classified & original description: CDS=1-2463 0.02 OrthoFinder output from all 47 species
Cba_g20046 No alias not classified & original description: none 0.06 OrthoFinder output from all 47 species
Cba_g25572 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Cba_g35085 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Cba_g66997 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ceric.04G036800.1 Ceric.04G036800 not classified & original description: pacid=50632550... 0.02 OrthoFinder output from all 47 species
Ceric.04G095300.1 OTP84, Ceric.04G095300 not classified & original description: pacid=50630887... 0.02 OrthoFinder output from all 47 species
Ceric.18G000100.1 CRR22, Ceric.18G000100 ssDNA-binding protein *(OSB) & original description:... 0.02 OrthoFinder output from all 47 species
Ceric.23G076700.1 OTP84, Ceric.23G076700 not classified & original description: pacid=50610256... 0.06 OrthoFinder output from all 47 species
Ceric.29G070600.1 Ceric.29G070600 not classified & original description: pacid=50625806... 0.04 OrthoFinder output from all 47 species
Ceric.32G058000.1 Ceric.32G058000 not classified & original description: pacid=50598467... 0.03 OrthoFinder output from all 47 species
Ceric.33G050800.1 CRR22, Ceric.33G050800 not classified & original description: pacid=50606654... 0.02 OrthoFinder output from all 47 species
Ceric.38G032900.1 CRR22, Ceric.38G032900 not classified & original description: pacid=50580371... 0.04 OrthoFinder output from all 47 species
Dac_g18289 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Dcu_g30253 No alias ssDNA-binding protein *(OSB) & original description: none 0.05 OrthoFinder output from all 47 species
Len_g13067 No alias not classified & original description: none 0.06 OrthoFinder output from all 47 species
Msp_g28692 No alias not classified & original description: none 0.06 OrthoFinder output from all 47 species
Msp_g48394 No alias ssDNA-binding protein *(OSB) & original description: none 0.04 OrthoFinder output from all 47 species
Nbi_g06304 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Nbi_g16471 No alias not classified & original description: none 0.06 OrthoFinder output from all 47 species
Nbi_g21989 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Nbi_g36959 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Pir_g03112 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Pnu_g23599 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Pnu_g29945 CRR22 not classified & original description: none 0.05 OrthoFinder output from all 47 species
Ppi_g04637 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Ppi_g31968 CRR2 not classified & original description: none 0.04 OrthoFinder output from all 47 species
Ppi_g33169 CRR22 not classified & original description: none 0.02 OrthoFinder output from all 47 species
Ppi_g43340 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Ppi_g46657 No alias ssDNA-binding protein *(OSB) & original description: none 0.05 OrthoFinder output from all 47 species
Ppi_g48495 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Ppi_g53946 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Ppi_g59316 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Solyc08g076150.4.1 Solyc08g076150 Pentatricopeptide repeat-containing protein At1g31920... 0.03 OrthoFinder output from all 47 species
Solyc12g096510.3.1 Solyc12g096510 Pentatricopeptide repeat-containing protein At5g66520... 0.05 OrthoFinder output from all 47 species
Spa_g07138 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Spa_g50540 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Tin_g03804 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Tin_g17146 VAC1, ECB2, ATECB2 not classified & original description: none 0.04 OrthoFinder output from all 47 species
Tin_g20089 No alias ssDNA-binding protein *(OSB) & original description: none 0.04 OrthoFinder output from all 47 species
Tin_g20109 OTP84 not classified & original description: none 0.04 OrthoFinder output from all 47 species
Tin_g21799 No alias ssDNA-binding protein *(OSB) & original description: none 0.04 OrthoFinder output from all 47 species
Tin_g22636 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Tin_g23278 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Tin_g35636 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence

Type GO Term Name Evidence Source

No Predicted GO terms available for this sequence

InterPro domains Description Start Stop
IPR002885 Pentatricopeptide_repeat 73 122
IPR002885 Pentatricopeptide_repeat 176 223
No external refs found!