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  5. Cba_g07331

Cba_g07331


Description : component *(uS3) of small ribosomal-subunit (SSU) proteome & original description: none


Gene families : OG0001769 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0001769_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Cba_g07331
Cluster HCCA: Cluster_245

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00030p00157370 evm_27.TU.AmTr_v1... Protein biosynthesis.cytosolic ribosome.small subunit... 0.02 OrthoFinder output from all 47 species
Adi_g083363 No alias component *(uS3) of small ribosomal-subunit (SSU)... 0.03 OrthoFinder output from all 47 species
Als_g11830 No alias component *(uS3) of small ribosomal-subunit (SSU)... 0.02 OrthoFinder output from all 47 species
Lfl_g12476 No alias component *(uS3) of small ribosomal-subunit (SSU)... 0.03 OrthoFinder output from all 47 species
Lfl_g25979 No alias component *(uS3) of small ribosomal-subunit (SSU)... 0.05 OrthoFinder output from all 47 species
Spa_g24354 No alias component *(uS3) of small ribosomal-subunit (SSU)... 0.03 OrthoFinder output from all 47 species
Spa_g51511 No alias component *(uS3) of small ribosomal-subunit (SSU)... 0.02 OrthoFinder output from all 47 species
Spa_g54394 No alias component *(uS3) of small ribosomal-subunit (SSU)... 0.02 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0003723 RNA binding IEA Interproscan
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Type GO Term Name Evidence Source
MF GO:0003779 actin binding IEP HCCA
MF GO:0003824 catalytic activity IEP HCCA
MF GO:0004611 phosphoenolpyruvate carboxykinase activity IEP HCCA
MF GO:0004672 protein kinase activity IEP HCCA
BP GO:0006099 tricarboxylic acid cycle IEP HCCA
BP GO:0006468 protein phosphorylation IEP HCCA
BP GO:0006886 intracellular protein transport IEP HCCA
BP GO:0006996 organelle organization IEP HCCA
BP GO:0007010 cytoskeleton organization IEP HCCA
MF GO:0008964 phosphoenolpyruvate carboxylase activity IEP HCCA
BP GO:0015977 carbon fixation IEP HCCA
BP GO:0016192 vesicle-mediated transport IEP HCCA
MF GO:0016301 kinase activity IEP HCCA
BP GO:0016310 phosphorylation IEP HCCA
MF GO:0016740 transferase activity IEP HCCA
MF GO:0016773 phosphotransferase activity, alcohol group as acceptor IEP HCCA
MF GO:0016830 carbon-carbon lyase activity IEP HCCA
MF GO:0016831 carboxy-lyase activity IEP HCCA
CC GO:0030117 membrane coat IEP HCCA
CC GO:0030120 vesicle coat IEP HCCA
CC GO:0030126 COPI vesicle coat IEP HCCA
InterPro domains Description Start Stop
IPR001351 Ribosomal_S3_C 107 189
IPR004044 KH_dom_type_2 21 94
No external refs found!