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  5. Cba_g07307

Cba_g07307 (RPL18)


Aliases : RPL18

Description : component *(eL18) of large ribosomal-subunit (LSU) proteome & original description: none


Gene families : OG0001263 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0001263_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Cba_g07307

Target Alias Description ECC score Gene Family Method Actions
AT3G05590 RPL18 ribosomal protein L18 0.02 OrthoFinder output from all 47 species
Adi_g013370 RPL18 component *(eL18) of large ribosomal-subunit (LSU)... 0.02 OrthoFinder output from all 47 species
Aop_g02367 RPL18 component *(eL18) of large ribosomal-subunit (LSU)... 0.03 OrthoFinder output from all 47 species
Ceric.38G049200.1 RPL18, Ceric.38G049200 component *(eL18) of large ribosomal-subunit (LSU)... 0.04 OrthoFinder output from all 47 species
Cpa|evm.model.tig00000142.18 RPL18 60S ribosomal protein L18 (Fragment) OS=Cicer arietinum 0.01 OrthoFinder output from all 47 species
Cre12.g512600 RPL18 Protein biosynthesis.cytosolic ribosome.large subunit... 0.04 OrthoFinder output from all 47 species
LOC_Os05g06310.1 LOC_Os05g06310 component RPL18 of LSU proteome component 0.02 OrthoFinder output from all 47 species
Mp1g22500.1 No alias component RPL18 of LSU proteome component 0.02 OrthoFinder output from all 47 species
Ore_g19871 RPL18 component *(eL18) of large ribosomal-subunit (LSU)... 0.04 OrthoFinder output from all 47 species
Pir_g36266 RPL18 component *(eL18) of large ribosomal-subunit (LSU)... 0.03 OrthoFinder output from all 47 species
Pp3c2_34080V3.1 RPL18, Pp3c2_34080 ribosomal protein L18 0.01 OrthoFinder output from all 47 species
Pp3c7_22030V3.1 RPL18, Pp3c7_22030 ribosomal protein L18 0.02 OrthoFinder output from all 47 species
Sam_g06146 No alias component *(eL18) of large ribosomal-subunit (LSU)... 0.02 OrthoFinder output from all 47 species
Sam_g11427 No alias component *(eL18) of large ribosomal-subunit (LSU)... 0.02 OrthoFinder output from all 47 species
Smo267976 RPL18 Protein biosynthesis.cytosolic ribosome.large subunit... 0.02 OrthoFinder output from all 47 species
Solyc01g099900.4.1 RPL18, Solyc01g099900 component RPL18 of LSU proteome component 0.03 OrthoFinder output from all 47 species
Solyc09g075290.3.1 RPL18, Solyc09g075290 component RPL18 of LSU proteome component 0.02 OrthoFinder output from all 47 species
Zm00001e026750_P001 Zm00001e026750 component RPL18 of LSU proteome component 0.03 OrthoFinder output from all 47 species
Zm00001e035836_P001 Zm00001e035836 component RPL18 of LSU proteome component 0.03 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0003674 molecular_function IEP HCCA
MF GO:0004842 ubiquitin-protein transferase activity IEP HCCA
MF GO:0005488 binding IEP HCCA
BP GO:0006807 nitrogen compound metabolic process IEP HCCA
BP GO:0008150 biological_process IEP HCCA
MF GO:0008270 zinc ion binding IEP HCCA
BP GO:0016567 protein ubiquitination IEP HCCA
MF GO:0016740 transferase activity IEP HCCA
BP GO:0019538 protein metabolic process IEP HCCA
MF GO:0019787 ubiquitin-like protein transferase activity IEP HCCA
BP GO:0032446 protein modification by small protein conjugation IEP HCCA
MF GO:0035673 oligopeptide transmembrane transporter activity IEP HCCA
BP GO:0036211 protein modification process IEP HCCA
MF GO:0042887 amide transmembrane transporter activity IEP HCCA
BP GO:0043170 macromolecule metabolic process IEP HCCA
BP GO:0043412 macromolecule modification IEP HCCA
MF GO:0046983 protein dimerization activity IEP HCCA
BP GO:0070647 protein modification by small protein conjugation or removal IEP HCCA
MF GO:0140096 catalytic activity, acting on a protein IEP HCCA
BP GO:1901564 organonitrogen compound metabolic process IEP HCCA
MF GO:1904680 peptide transmembrane transporter activity IEP HCCA
InterPro domains Description Start Stop
IPR021131 Ribosomal_L18e/L15P 1 163
No external refs found!