Cba_g07180 (RPL16A)


Aliases : RPL16A

Description : component *(uL5) of large ribosomal-subunit (LSU) proteome & original description: none


Gene families : OG0001936 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0001936_tree

Sequence : coding (download), protein (download)


Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Cba_g07180

Target Alias Description ECC score Gene Family Method Actions
AT2G42740 RPL16A ribosomal protein large subunit 16A 0.04 OrthoFinder output from all 47 species
AT3G58700 No alias Ribosomal L5P family protein 0.03 OrthoFinder output from all 47 species
AT5G45775 No alias Ribosomal L5P family protein 0.02 OrthoFinder output from all 47 species
Aop_g30844 No alias component *(uL5) of large ribosomal-subunit (LSU)... 0.05 OrthoFinder output from all 47 species
Azfi_s0350.g066549 RPL16A component *(uL5) of large ribosomal-subunit (LSU)... 0.03 OrthoFinder output from all 47 species
Cre01.g027000 RPL16A Protein biosynthesis.cytosolic ribosome.large subunit... 0.02 OrthoFinder output from all 47 species
GSVIVT01020743001 RPL16A Protein biosynthesis.cytosolic ribosome.large subunit... 0.03 OrthoFinder output from all 47 species
GSVIVT01021244001 RPL16A Protein biosynthesis.cytosolic ribosome.large subunit... 0.02 OrthoFinder output from all 47 species
Gb_22357 RPL16A component RPL11 of LSU proteome component 0.03 OrthoFinder output from all 47 species
LOC_Os01g10820.1 RPL16A, LOC_Os01g10820 component RPL11 of LSU proteome component 0.04 OrthoFinder output from all 47 species
LOC_Os05g11710.1 RPL16A, LOC_Os05g11710 component RPL11 of LSU proteome component 0.04 OrthoFinder output from all 47 species
LOC_Os06g35730.1 RPL16A, LOC_Os06g35730 component RPL11 of LSU proteome component 0.03 OrthoFinder output from all 47 species
Mp2g24740.1 RPL16A component RPL11 of LSU proteome component 0.01 OrthoFinder output from all 47 species
Mp6g18870.1 RPL16A component RPL11 of LSU proteome component 0.02 OrthoFinder output from all 47 species
Solyc02g086240.3.1 RPL16A, Solyc02g086240 component RPL11 of LSU proteome component 0.02 OrthoFinder output from all 47 species
Solyc07g055230.4.1 RPL16A, Solyc07g055230 component RPL11 of LSU proteome component 0.02 OrthoFinder output from all 47 species
Solyc12g010930.2.1 RPL16A, Solyc12g010930 component RPL11 of LSU proteome component 0.02 OrthoFinder output from all 47 species
Spa_g07232 RPL16A component *(uL5) of large ribosomal-subunit (LSU)... 0.03 OrthoFinder output from all 47 species
Spa_g07233 RPL16A component *(uL5) of large ribosomal-subunit (LSU)... 0.02 OrthoFinder output from all 47 species
Spa_g22809 No alias component *(uL5) of large ribosomal-subunit (LSU)... 0.02 OrthoFinder output from all 47 species
Spa_g25528 No alias component *(uL5) of large ribosomal-subunit (LSU)... 0.03 OrthoFinder output from all 47 species
Spa_g30816 RPL16A component *(uL5) of large ribosomal-subunit (LSU)... 0.02 OrthoFinder output from all 47 species
Zm00001e024913_P001 RPL16A, Zm00001e024913 component RPL11 of LSU proteome component 0.02 OrthoFinder output from all 47 species
Zm00001e026886_P003 RPL16A, Zm00001e026886 component RPL11 of LSU proteome component 0.02 OrthoFinder output from all 47 species
Zm00001e037255_P001 RPL16A, Zm00001e037255 component RPL11 of LSU proteome component 0.02 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence

Type GO Term Name Evidence Source
CC GO:0000148 1,3-beta-D-glucan synthase complex IEP HCCA
BP GO:0000271 polysaccharide biosynthetic process IEP HCCA
MF GO:0003843 1,3-beta-D-glucan synthase activity IEP HCCA
BP GO:0005976 polysaccharide metabolic process IEP HCCA
BP GO:0006073 cellular glucan metabolic process IEP HCCA
BP GO:0006074 (1->3)-beta-D-glucan metabolic process IEP HCCA
BP GO:0006075 (1->3)-beta-D-glucan biosynthetic process IEP HCCA
MF GO:0008194 UDP-glycosyltransferase activity IEP HCCA
BP GO:0009250 glucan biosynthetic process IEP HCCA
BP GO:0016051 carbohydrate biosynthetic process IEP HCCA
MF GO:0016758 hexosyltransferase activity IEP HCCA
BP GO:0033692 cellular polysaccharide biosynthetic process IEP HCCA
BP GO:0034637 cellular carbohydrate biosynthetic process IEP HCCA
MF GO:0035251 UDP-glucosyltransferase activity IEP HCCA
BP GO:0044042 glucan metabolic process IEP HCCA
BP GO:0044262 cellular carbohydrate metabolic process IEP HCCA
BP GO:0044264 cellular polysaccharide metabolic process IEP HCCA
MF GO:0046527 glucosyltransferase activity IEP HCCA
BP GO:0051273 beta-glucan metabolic process IEP HCCA
BP GO:0051274 beta-glucan biosynthetic process IEP HCCA
CC GO:0098797 plasma membrane protein complex IEP HCCA
CC GO:1990234 transferase complex IEP HCCA
InterPro domains Description Start Stop
IPR031309 Ribosomal_L5_C 67 165
IPR031310 Ribosomal_L5_N 10 63
No external refs found!