Cba_g07170


Description : not classified & original description: none


Gene families : OG0000000 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): No tree available for this family

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Cba_g07170

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00010p00113430 evm_27.TU.AmTr_v1... Pentatricopeptide repeat-containing protein At1g18485... 0.02 OrthoFinder output from all 47 species
AMTR_s00019p00240430 OSB3,... RNA biosynthesis.organelle machineries.RNA polymerase... 0.03 OrthoFinder output from all 47 species
AT3G53360 No alias Tetratricopeptide repeat (TPR)-like superfamily protein 0.02 OrthoFinder output from all 47 species
Adi_g023974 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Adi_g034364 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Adi_g056630 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Adi_g067784 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ala_g11495 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Ala_g35880 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ala_g37733 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Als_g03179 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Als_g04452 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Als_g05088 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Als_g06363 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Als_g06397 OTP86 not classified & original description: none 0.02 OrthoFinder output from all 47 species
Als_g18796 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Als_g19114 EMB2261 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Als_g30874 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Als_g54869 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Aob_g06729 OTP86 not classified & original description: none 0.04 OrthoFinder output from all 47 species
Aob_g28608 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aob_g36684 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aob_g40645 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Aspi01Gene38168.t1 Aspi01Gene38168 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aspi01Gene54509.t1 Aspi01Gene54509 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Azfi_s0004.g008405 No alias not classified & original description: CDS=233-2125 0.03 OrthoFinder output from all 47 species
Azfi_s0007.g010932 REME1 not classified & original description: CDS=1-1479 0.03 OrthoFinder output from all 47 species
Azfi_s0059.g034666 No alias not classified & original description: CDS=1-1770 0.03 OrthoFinder output from all 47 species
Azfi_s0081.g038550 EMB2758 not classified & original description: CDS=1-1851 0.03 OrthoFinder output from all 47 species
Cba_g05522 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Cba_g45888 CRR2 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Cba_g67841 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ceric.05G086700.1 Ceric.05G086700 not classified & original description: pacid=50579096... 0.04 OrthoFinder output from all 47 species
Ceric.05G093000.1 Ceric.05G093000 not classified & original description: pacid=50577993... 0.03 OrthoFinder output from all 47 species
Ceric.06G062800.1 Ceric.06G062800 not classified & original description: pacid=50620833... 0.03 OrthoFinder output from all 47 species
Ceric.22G072200.1 Ceric.22G072200 not classified & original description: pacid=50614353... 0.03 OrthoFinder output from all 47 species
Ceric.28G037300.1 Ceric.28G037300 not classified & original description: pacid=50570602... 0.03 OrthoFinder output from all 47 species
Ceric.31G027200.1 OTP86, Ceric.31G027200 not classified & original description: pacid=50574199... 0.03 OrthoFinder output from all 47 species
Ceric.32G076900.1 Ceric.32G076900 not classified & original description: pacid=50598031... 0.03 OrthoFinder output from all 47 species
Ceric.33G047500.1 OTP84, Ceric.33G047500 not classified & original description: pacid=50606812... 0.06 OrthoFinder output from all 47 species
Ceric.35G061000.1 CRR22, Ceric.35G061000 not classified & original description: pacid=50581720... 0.03 OrthoFinder output from all 47 species
Ceric.39G011500.1 Ceric.39G011500 not classified & original description: pacid=50582697... 0.02 OrthoFinder output from all 47 species
Ceric.39G046500.1 Ceric.39G046500 not classified & original description: pacid=50582543... 0.03 OrthoFinder output from all 47 species
Dac_g03211 EMB2758 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Dcu_g08274 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Dcu_g26802 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Dcu_g36645 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Dde_g05661 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Dde_g16077 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Dde_g16499 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Dde_g22165 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Dde_g25070 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Dde_g28407 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Dde_g36830 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Dde_g44055 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Dde_g49830 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Dde_g50255 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ehy_g12280 CRR2 not classified & original description: none 0.02 OrthoFinder output from all 47 species
Ehy_g14557 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
LOC_Os02g18810.1 LOC_Os02g18810 Putative pentatricopeptide repeat-containing protein... 0.03 OrthoFinder output from all 47 species
Len_g18947 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Len_g23407 CRR22 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Lfl_g04187 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Lfl_g07418 EMB2758 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Lfl_g28060 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
MA_10338179g0010 OTP84 Pentatricopeptide repeat-containing protein At3g57430,... 0.03 OrthoFinder output from all 47 species
Ore_g05196 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ore_g14266 No alias ssDNA-binding protein *(OSB) & original description: none 0.02 OrthoFinder output from all 47 species
Pir_g08638 CRR22 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Pir_g12598 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Pir_g32492 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Pir_g47021 OTP84 not classified & original description: none 0.02 OrthoFinder output from all 47 species
Pir_g63391 EMB2758 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Pir_g63646 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Pir_g63825 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Pir_g63866 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Pnu_g16163 OTP84 not classified & original description: none 0.04 OrthoFinder output from all 47 species
Pnu_g25238 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Pnu_g30997 OTP84 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ppi_g07606 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Ppi_g16080 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ppi_g18663 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Ppi_g29479 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ppi_g39236 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ppi_g55608 LPA66 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ppi_g59338 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Ppi_g62370 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Sacu_v1.1_s0023.g008810 No alias not classified & original description: CDS=1-1683 0.04 OrthoFinder output from all 47 species
Sacu_v1.1_s0042.g012770 No alias not classified & original description: CDS=1-1605 0.02 OrthoFinder output from all 47 species
Sacu_v1.1_s0076.g017463 No alias not classified & original description: CDS=1-2316 0.02 OrthoFinder output from all 47 species
Sam_g13569 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Sam_g37160 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Smo73641 EMB2758 Pentatricopeptide repeat-containing protein DOT4,... 0.03 OrthoFinder output from all 47 species
Smo92610 No alias Pentatricopeptide repeat-containing protein At5g56310... 0.02 OrthoFinder output from all 47 species
Spa_g07598 OTP84 not classified & original description: none 0.02 OrthoFinder output from all 47 species
Spa_g12442 CRR22 not classified & original description: none 0.04 OrthoFinder output from all 47 species
Spa_g23577 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Spa_g33790 VAC1, ECB2, ATECB2 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Spa_g45719 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Tin_g04082 CRR22 not classified & original description: none 0.03 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence

Type GO Term Name Evidence Source
MF GO:0004180 carboxypeptidase activity IEP HCCA
MF GO:0004181 metallocarboxypeptidase activity IEP HCCA
MF GO:0008233 peptidase activity IEP HCCA
MF GO:0008235 metalloexopeptidase activity IEP HCCA
MF GO:0008237 metallopeptidase activity IEP HCCA
MF GO:0008238 exopeptidase activity IEP HCCA
InterPro domains Description Start Stop
IPR002885 Pentatricopeptide_repeat 74 120
No external refs found!