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  5. Cba_g07057

Cba_g07057


Description : not classified & original description: none


Gene families : OG0000000 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): No tree available for this family

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Cba_g07057

Target Alias Description ECC score Gene Family Method Actions
Als_g06770 OTP86 ssDNA-binding protein *(OSB) & original description: none 0.04 OrthoFinder output from all 47 species
Als_g09212 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Als_g14128 CRR2 not classified & original description: none 0.02 OrthoFinder output from all 47 species
Als_g32467 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Aop_g06679 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Aop_g14571 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Aop_g31824 VAC1, ECB2, ATECB2 not classified & original description: none 0.04 OrthoFinder output from all 47 species
Aop_g68090 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Azfi_s0021.g015813 No alias not classified & original description: CDS=355-3027 0.05 OrthoFinder output from all 47 species
Cba_g07323 EMB2758 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Cba_g67841 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Cba_g76220 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Dde_g04238 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
MA_82595g0010 No alias Putative pentatricopeptide repeat-containing protein... 0.02 OrthoFinder output from all 47 species
Msp_g03905 REME1 not classified & original description: none 0.06 OrthoFinder output from all 47 species
Msp_g23052 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Nbi_g20337 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Nbi_g32189 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Smo82255 CRR2 Pentatricopeptide repeat-containing protein At4g33990... 0.04 OrthoFinder output from all 47 species
Solyc01g098480.3.1 Solyc01g098480 Pentatricopeptide repeat-containing protein At2g21090... 0.03 OrthoFinder output from all 47 species
Spa_g07522 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Spa_g08093 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Spa_g09924 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Spa_g12845 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Spa_g18014 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Spa_g26166 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Spa_g44799 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Tin_g25677 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Tin_g38392 No alias not classified & original description: none 0.06 OrthoFinder output from all 47 species
Zm00001e027978_P001 MEF1, Zm00001e027978 RNA editing factor (MEF1) 0.02 OrthoFinder output from all 47 species
Zm00001e036301_P001 Zm00001e036301 Pentatricopeptide repeat-containing protein At4g30700... 0.02 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0003723 RNA binding IEP HCCA
InterPro domains Description Start Stop
IPR002885 Pentatricopeptide_repeat 192 216
IPR002885 Pentatricopeptide_repeat 116 162
IPR002885 Pentatricopeptide_repeat 15 61
No external refs found!