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Description : not classified & original description: none
Gene families : OG0000184 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000184_tree
Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.
| Target | Alias | Description | ECC score | Gene Family Method | Actions |
|---|---|---|---|---|---|
| AT1G26370 | No alias | RNA helicase family protein | 0.02 | OrthoFinder output from all 47 species | |
| AT1G27900 | No alias | RNA helicase family protein | 0.03 | OrthoFinder output from all 47 species | |
| Als_g23007 | No alias | RNA helicase Prp43 of Intron-Lariat Spliceosome complex... | 0.03 | OrthoFinder output from all 47 species | |
| Aob_g19314 | No alias | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Aop_g15706 | ESP3, EMB2733 | RNA helicase *(Prp2) & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Azfi_s0054.g033634 | ESP3, EMB2733 | not classified & original description: CDS=1-2769 | 0.03 | OrthoFinder output from all 47 species | |
| LOC_Os01g11370.1 | LOC_Os01g11370 | Probable pre-mRNA-splicing factor ATP-dependent RNA... | 0.02 | OrthoFinder output from all 47 species | |
| LOC_Os02g19860.1 | LOC_Os02g19860 | Probable pre-mRNA-splicing factor ATP-dependent RNA... | 0.02 | OrthoFinder output from all 47 species | |
| LOC_Os11g20554.1 | LOC_Os11g20554 | Probable pre-mRNA-splicing factor ATP-dependent RNA... | 0.02 | OrthoFinder output from all 47 species | |
| Len_g31554 | No alias | RNA helicase *(Prp22) & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Ore_g30533 | No alias | RNA helicase *(Prp22) & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Sacu_v1.1_s0024.g009161 | No alias | not classified & original description: CDS=1-1362 | 0.02 | OrthoFinder output from all 47 species | |
| Sacu_v1.1_s0047.g013414 | EMB3011 | RNA helicase *(Prp16) & original description: CDS=171-3614 | 0.04 | OrthoFinder output from all 47 species | |
| Spa_g12381 | No alias | RNA helicase *(Prp22) & original description: none | 0.03 | OrthoFinder output from all 47 species |
| Type | GO Term | Name | Evidence | Source |
|---|---|---|---|---|
No GO annotation available for this sequence |
| Type | GO Term | Name | Evidence | Source |
|---|---|---|---|---|
| MF | GO:0004386 | helicase activity | IEP | HCCA |
| CC | GO:0005634 | nucleus | IEP | HCCA |
| CC | GO:0005732 | sno(s)RNA-containing ribonucleoprotein complex | IEP | HCCA |
| BP | GO:0006364 | rRNA processing | IEP | HCCA |
| BP | GO:0006396 | RNA processing | IEP | HCCA |
| BP | GO:0016072 | rRNA metabolic process | IEP | HCCA |
| CC | GO:0034457 | Mpp10 complex | IEP | HCCA |
| BP | GO:0034470 | ncRNA processing | IEP | HCCA |
| BP | GO:0034660 | ncRNA metabolic process | IEP | HCCA |
| CC | GO:0140513 | nuclear protein-containing complex | IEP | HCCA |
| CC | GO:1990904 | ribonucleoprotein complex | IEP | HCCA |
| InterPro domains | Description | Start | Stop |
|---|---|---|---|
| IPR011709 | DEAD-box_helicase_OB_fold | 1 | 73 |
| No external refs found! |