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Aliases : CAF2, ATCAF2
Description : not classified & original description: none
Gene families : OG0001061 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0001061_tree
Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.
| Target | Alias | Description | ECC score | Gene Family Method | Actions |
|---|---|---|---|---|---|
| AMTR_s00056p00043140 | ATCAF1, CAF1,... | RNA processing.organelle machineries.RNA... | 0.01 | OrthoFinder output from all 47 species | |
| AMTR_s00062p00145630 | evm_27.TU.AmTr_v1... | CRS2-associated factor 2, mitochondrial OS=Oryza sativa... | 0.01 | OrthoFinder output from all 47 species | |
| AT2G20020 | ATCAF1, CAF1 | RNA-binding CRS1 / YhbY (CRM) domain-containing protein | 0.01 | OrthoFinder output from all 47 species | |
| AT4G31010 | No alias | RNA-binding CRS1 / YhbY (CRM) domain-containing protein | 0.01 | OrthoFinder output from all 47 species | |
| Adi_g015701 | No alias | not classified & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| Adi_g015702 | ATCAF1, CAF1 | component *(CAF) of CRS2-CAF plastidial RNA splicing... | 0.03 | OrthoFinder output from all 47 species | |
| Adi_g054906 | ATCAF1, CAF1 | not classified & original description: none | 0.01 | OrthoFinder output from all 47 species | |
| Adi_g068648 | CAF2, ATCAF2 | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Adi_g106797 | No alias | not classified & original description: none | 0.06 | OrthoFinder output from all 47 species | |
| Ala_g02604 | CAF2, ATCAF2 | component *(CAF) of CRS2-CAF plastidial RNA splicing... | 0.02 | OrthoFinder output from all 47 species | |
| Ala_g19873 | CAF2, ATCAF2 | component *(CAF) of CRS2-CAF plastidial RNA splicing... | 0.02 | OrthoFinder output from all 47 species | |
| Ala_g22094 | ATCAF1, CAF1 | not classified & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| Ala_g34328 | ATCAF1, CAF1 | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Als_g13967 | ATCAF1, CAF1 | component *(CAF) of CRS2-CAF plastidial RNA splicing... | 0.03 | OrthoFinder output from all 47 species | |
| Als_g15381 | ATCAF1, CAF1 | component *(CAF) of CRS2-CAF plastidial RNA splicing... | 0.02 | OrthoFinder output from all 47 species | |
| Als_g16109 | ATCAF1, CAF1 | component *(CAF) of CRS2-CAF plastidial RNA splicing... | 0.02 | OrthoFinder output from all 47 species | |
| Als_g30903 | CAF2, ATCAF2 | component *(CAF) of CRS2-CAF plastidial RNA splicing... | 0.01 | OrthoFinder output from all 47 species | |
| Als_g63274 | CAF2, ATCAF2 | component *(CAF) of CRS2-CAF plastidial RNA splicing... | 0.02 | OrthoFinder output from all 47 species | |
| Aob_g07417 | CAF2, ATCAF2 | component *(CAF) of CRS2-CAF plastidial RNA splicing... | 0.02 | OrthoFinder output from all 47 species | |
| Aob_g14385 | CAF2, ATCAF2 | component *(CAF) of CRS2-CAF plastidial RNA splicing... | 0.05 | OrthoFinder output from all 47 species | |
| Aop_g09015 | CAF2, ATCAF2 | component *(CAF) of CRS2-CAF plastidial RNA splicing... | 0.02 | OrthoFinder output from all 47 species | |
| Aop_g13815 | CAF2, ATCAF2 | component *(CAF) of CRS2-CAF plastidial RNA splicing... | 0.04 | OrthoFinder output from all 47 species | |
| Aspi01Gene18814.t1 | ATCAF1, CAF1,... | not classified & original description: none | 0.01 | OrthoFinder output from all 47 species | |
| Aspi01Gene60098.t1 | ATCAF1, CAF1,... | not classified & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| Aspi01Gene60099.t1 | ATCAF1, CAF1,... | not classified & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| Aspi01Gene65741.t1 | ATCAF1, CAF1,... | not classified & original description: none | 0.01 | OrthoFinder output from all 47 species | |
| Aspi01Gene65743.t1 | CAF2, ATCAF2,... | not classified & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| Azfi_s0045.g029983 | CAF2, ATCAF2 | component *(CAF) of CRS2-CAF plastidial RNA splicing... | 0.03 | OrthoFinder output from all 47 species | |
| Azfi_s0435.g069919 | CAF2, ATCAF2 | component *(CAF) of CRS2-CAF plastidial RNA splicing... | 0.04 | OrthoFinder output from all 47 species | |
| Cba_g12900 | CAF2, ATCAF2 | component *(CAF) of CRS2-CAF plastidial RNA splicing... | 0.02 | OrthoFinder output from all 47 species | |
| Cba_g72184 | CAF2, ATCAF2 | component *(CAF) of CRS2-CAF plastidial RNA splicing... | 0.01 | OrthoFinder output from all 47 species | |
| Cba_g78791 | ATCAF1, CAF1 | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Ceric.11G050500.1 | CAF2, ATCAF2,... | component *(CAF) of CRS2-CAF plastidial RNA splicing... | 0.01 | OrthoFinder output from all 47 species | |
| Ceric.13G007400.1 | CAF2, ATCAF2,... | not classified & original description: pacid=50635785... | 0.03 | OrthoFinder output from all 47 species | |
| Ceric.13G021700.1 | ATCAF1, CAF1,... | component *(CAF) of CRS2-CAF plastidial RNA splicing... | 0.01 | OrthoFinder output from all 47 species | |
| Ceric.14G027700.1 | Ceric.14G027700 | not classified & original description: pacid=50634377... | 0.02 | OrthoFinder output from all 47 species | |
| Ceric.17G046000.1 | ATCAF1, CAF1,... | not classified & original description: pacid=50617225... | 0.01 | OrthoFinder output from all 47 species | |
| Dac_g10639 | ATCAF1, CAF1 | not classified & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| Dac_g12754 | CAF2, ATCAF2 | component *(CAF) of CRS2-CAF plastidial RNA splicing... | 0.03 | OrthoFinder output from all 47 species | |
| Dcu_g14796 | ATCAF1, CAF1 | component *(CAF) of CRS2-CAF plastidial RNA splicing... | 0.02 | OrthoFinder output from all 47 species | |
| Dcu_g20587 | ATCAF1, CAF1 | component *(CAF) of CRS2-CAF plastidial RNA splicing... | 0.03 | OrthoFinder output from all 47 species | |
| Dde_g14923 | ATCAF1, CAF1 | not classified & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| Dde_g16819 | CAF2, ATCAF2 | component *(CAF) of CRS2-CAF plastidial RNA splicing... | 0.03 | OrthoFinder output from all 47 species | |
| Dde_g25068 | CAF2, ATCAF2 | component *(CAF) of CRS2-CAF plastidial RNA splicing... | 0.05 | OrthoFinder output from all 47 species | |
| Ehy_g02479 | ATCAF1, CAF1 | mCSF mitochondrial RNA splicing factor & original... | 0.01 | OrthoFinder output from all 47 species | |
| Ehy_g10026 | CAF2, ATCAF2 | component *(CAF) of CRS2-CAF plastidial RNA splicing... | 0.02 | OrthoFinder output from all 47 species | |
| Ehy_g19169 | No alias | not classified & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| GSVIVT01015331001 | ATCAF1, CAF1 | RNA processing.organelle machineries.RNA... | 0.03 | OrthoFinder output from all 47 species | |
| GSVIVT01027582001 | No alias | RNA processing.organelle machineries.RNA... | 0.07 | OrthoFinder output from all 47 species | |
| Gb_32774 | CAF2, ATCAF2 | CRS2-associated factor 2, chloroplastic OS=Arabidopsis... | 0.02 | OrthoFinder output from all 47 species | |
| LOC_Os08g07790.1 | LOC_Os08g07790 | mCSF mitochondrial RNA splicing factor | 0.02 | OrthoFinder output from all 47 species | |
| Len_g08762 | CAF2, ATCAF2 | component *(CAF) of CRS2-CAF plastidial RNA splicing... | 0.06 | OrthoFinder output from all 47 species | |
| Len_g22390 | CAF2, ATCAF2 | component *(CAF) of CRS2-CAF plastidial RNA splicing... | 0.02 | OrthoFinder output from all 47 species | |
| Len_g42601 | ATCAF1, CAF1 | component *(CAF) of CRS2-CAF plastidial RNA splicing... | 0.03 | OrthoFinder output from all 47 species | |
| Lfl_g11178 | ATCAF1, CAF1 | not classified & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| Lfl_g16965 | CAF2, ATCAF2 | component *(CAF) of CRS2-CAF plastidial RNA splicing... | 0.02 | OrthoFinder output from all 47 species | |
| Msp_g13314 | CAF2, ATCAF2 | component *(CAF) of CRS2-CAF plastidial RNA splicing... | 0.03 | OrthoFinder output from all 47 species | |
| Msp_g14666 | CAF2, ATCAF2 | component *(CAF) of CRS2-CAF plastidial RNA splicing... | 0.03 | OrthoFinder output from all 47 species | |
| Msp_g31805 | CAF2, ATCAF2 | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Nbi_g08909 | CAF2, ATCAF2 | component *(CAF) of CRS2-CAF plastidial RNA splicing... | 0.05 | OrthoFinder output from all 47 species | |
| Nbi_g10158 | ATCAF1, CAF1 | not classified & original description: none | 0.04 | OrthoFinder output from all 47 species | |
| Nbi_g24662 | CAF2, ATCAF2 | component *(CAF) of CRS2-CAF plastidial RNA splicing... | 0.03 | OrthoFinder output from all 47 species | |
| Nbi_g30110 | CAF2, ATCAF2 | component *(CAF) of CRS2-CAF plastidial RNA splicing... | 0.02 | OrthoFinder output from all 47 species | |
| Ore_g02160 | No alias | not classified & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| Ore_g02519 | No alias | not classified & original description: none | 0.01 | OrthoFinder output from all 47 species | |
| Ore_g08767 | CAF2, ATCAF2 | component *(CAF) of CRS2-CAF plastidial RNA splicing... | 0.01 | OrthoFinder output from all 47 species | |
| Pir_g08475 | CAF2, ATCAF2 | component *(CAF) of CRS2-CAF plastidial RNA splicing... | 0.02 | OrthoFinder output from all 47 species | |
| Pir_g10803 | ATCAF1, CAF1 | not classified & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| Pir_g36626 | CAF2, ATCAF2 | component *(CAF) of CRS2-CAF plastidial RNA splicing... | 0.02 | OrthoFinder output from all 47 species | |
| Ppi_g03045 | ATCAF1, CAF1 | not classified & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| Ppi_g05287 | CAF2, ATCAF2 | component *(CAF) of CRS2-CAF plastidial RNA splicing... | 0.01 | OrthoFinder output from all 47 species | |
| Ppi_g13842 | CAF2, ATCAF2 | component *(CAF) of CRS2-CAF plastidial RNA splicing... | 0.03 | OrthoFinder output from all 47 species | |
| Ppi_g29789 | No alias | not classified & original description: none | 0.01 | OrthoFinder output from all 47 species | |
| Ppi_g56937 | CAF2, ATCAF2 | not classified & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| Sacu_v1.1_s0001.g000387 | CAF2, ATCAF2 | component *(CAF) of CRS2-CAF plastidial RNA splicing... | 0.01 | OrthoFinder output from all 47 species | |
| Sacu_v1.1_s0088.g018530 | ATCAF1, CAF1 | not classified & original description: CDS=49-1527 | 0.01 | OrthoFinder output from all 47 species | |
| Sacu_v1.1_s1065.g027930 | ATCAF1, CAF1 | not classified & original description: CDS=49-1527 | 0.01 | OrthoFinder output from all 47 species | |
| Sam_g26827 | No alias | component *(CAF) of CRS2-CAF plastidial RNA splicing... | 0.01 | OrthoFinder output from all 47 species | |
| Sam_g51074 | No alias | component *(CAF) of CRS2-CAF plastidial RNA splicing... | 0.02 | OrthoFinder output from all 47 species | |
| Smo62891 | CAF2, ATCAF2 | RNA processing.organelle machineries.RNA... | 0.04 | OrthoFinder output from all 47 species | |
| Solyc01g091940.3.1 | Solyc01g091940 | mCSF mitochondrial RNA splicing factor | 0.04 | OrthoFinder output from all 47 species | |
| Solyc05g018240.4.1 | ATCAF1, CAF1,... | component CAF of CRS2-CAF plastidial RNA splicing factor... | 0.02 | OrthoFinder output from all 47 species | |
| Solyc11g066300.3.1 | CAF2, ATCAF2,... | component CAF of CRS2-CAF plastidial RNA splicing factor... | 0.04 | OrthoFinder output from all 47 species | |
| Spa_g10709 | ATCAF1, CAF1 | not classified & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| Spa_g31214 | CAF2, ATCAF2 | component *(CAF) of CRS2-CAF plastidial RNA splicing... | 0.04 | OrthoFinder output from all 47 species | |
| Spa_g51985 | CAF2, ATCAF2 | component *(CAF) of CRS2-CAF plastidial RNA splicing... | 0.04 | OrthoFinder output from all 47 species | |
| Tin_g12704 | ATCAF1, CAF1 | not classified & original description: none | 0.01 | OrthoFinder output from all 47 species |
| Type | GO Term | Name | Evidence | Source |
|---|---|---|---|---|
| MF | GO:0003723 | RNA binding | IEA | Interproscan |
| Type | GO Term | Name | Evidence | Source |
|---|---|---|---|---|
No Predicted GO terms available for this sequence |
| No external refs found! |