AMTR_s00030p00135000 (evm_27.TU.AmTr_v1.0_sc...)


Aliases : evm_27.TU.AmTr_v1.0_scaffold00030.82

Description : Protein degradation.peptide tagging.Ubiquitin (UBQ)-anchor addition (ubiquitylation).UBQ-ligase E3 activities.RING-domain E3 ligase activities.RING-H2-type E3 ligase


Gene families : OG_01_0012108 (Archaeplastida) Phylogenetic Tree(s): OG_01_0012108_tree ,
OG_02_0011376 (LandPlants) Phylogenetic Tree(s): OG_02_0011376_tree ,
OG_03_0012053 (SeedPlants) Phylogenetic Tree(s): OG_03_0012053_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: AMTR_s00030p00135000
Cluster HCCA: Cluster_217

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00010p00234150 evm_27.TU.AmTr_v1... No description available 0.07 Archaeplastida
AMTR_s00010p00234150 evm_27.TU.AmTr_v1... No description available 0.07 LandPlants
AMTR_s00010p00234150 evm_27.TU.AmTr_v1... No description available 0.06 SeedPlants

Type GO Term Name Evidence Source
MF GO:0005515 protein binding IEA Interproscan
MF GO:0008270 zinc ion binding IEA Interproscan
Type GO Term Name Evidence Source

No Predicted GO terms available for this sequence

InterPro domains Description Start Stop
IPR001841 Znf_RING 109 152
No external refs found!