Cba_g06624


Description : not classified & original description: none


Gene families : OG0000121 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000121_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Cba_g06624

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00013p00150040 SPL13, SPL13A,... RNA biosynthesis.transcriptional activation.SBP... 0.04 OrthoFinder output from all 47 species
AMTR_s00019p00235390 SPL8,... RNA biosynthesis.transcriptional activation.SBP... 0.04 OrthoFinder output from all 47 species
AMTR_s00022p00198330 AtSPL9, SPL9,... RNA biosynthesis.transcriptional activation.SBP... 0.05 OrthoFinder output from all 47 species
AMTR_s00025p00217130 SPL2,... RNA biosynthesis.transcriptional activation.SBP... 0.03 OrthoFinder output from all 47 species
AMTR_s00047p00197010 evm_27.TU.AmTr_v1... RNA biosynthesis.transcriptional activation.SBP... 0.03 OrthoFinder output from all 47 species
AMTR_s00106p00142470 SPL11,... RNA biosynthesis.transcriptional activation.SBP... 0.03 OrthoFinder output from all 47 species
AMTR_s00106p00142740 evm_27.TU.AmTr_v1... No description available 0.03 OrthoFinder output from all 47 species
AT1G27360 SPL11 squamosa promoter-like 11 0.03 OrthoFinder output from all 47 species
AT1G27370 SPL10 squamosa promoter binding protein-like 10 0.05 OrthoFinder output from all 47 species
AT2G42200 AtSPL9, SPL9 squamosa promoter binding protein-like 9 0.04 OrthoFinder output from all 47 species
AT5G43270 SPL2 squamosa promoter binding protein-like 2 0.03 OrthoFinder output from all 47 species
Adi_g010861 SPL8 SBP-type transcription factor & original description: none 0.02 OrthoFinder output from all 47 species
Adi_g058139 SPL10 SBP-type transcription factor & original description: none 0.03 OrthoFinder output from all 47 species
Adi_g104042 SPL11 SBP-type transcription factor & original description: none 0.02 OrthoFinder output from all 47 species
Ala_g14889 SPL2 SBP-type transcription factor & original description: none 0.04 OrthoFinder output from all 47 species
Als_g04360 SPL3 SBP-type transcription factor & original description: none 0.05 OrthoFinder output from all 47 species
Als_g06099 SPL8 SBP-type transcription factor & original description: none 0.06 OrthoFinder output from all 47 species
Als_g06796 SPL3 SBP-type transcription factor & original description: none 0.03 OrthoFinder output from all 47 species
Als_g11381 SPL2 SBP-type transcription factor & original description: none 0.07 OrthoFinder output from all 47 species
Als_g20948 SPL2 SBP-type transcription factor & original description: none 0.03 OrthoFinder output from all 47 species
Als_g25947 SPL2 SBP-type transcription factor & original description: none 0.03 OrthoFinder output from all 47 species
Als_g31920 No alias not classified & original description: none 0.07 OrthoFinder output from all 47 species
Als_g47037 SPL2 SBP-type transcription factor & original description: none 0.08 OrthoFinder output from all 47 species
Als_g47133 SPL2 SBP-type transcription factor & original description: none 0.07 OrthoFinder output from all 47 species
Aob_g14528 SPL8 SBP-type transcription factor & original description: none 0.05 OrthoFinder output from all 47 species
Aop_g08472 No alias SBP-type transcription factor & original description: none 0.04 OrthoFinder output from all 47 species
Aop_g10734 SPL2 SBP-type transcription factor & original description: none 0.04 OrthoFinder output from all 47 species
Aop_g22380 SPL2 SBP-type transcription factor & original description: none 0.04 OrthoFinder output from all 47 species
Aop_g38647 SPL8 SBP-type transcription factor & original description: none 0.03 OrthoFinder output from all 47 species
Aspi01Gene26291.t1 SPL3, Aspi01Gene26291 SBP-type transcription factor & original description: none 0.03 OrthoFinder output from all 47 species
Aspi01Gene67362.t1 Aspi01Gene67362 not classified & original description: none 0.05 OrthoFinder output from all 47 species
Azfi_s0147.g053031 SPL8 SBP-type transcription factor & original description: CDS=1-2847 0.03 OrthoFinder output from all 47 species
Cba_g09732 SPL3 SBP-type transcription factor & original description: none 0.03 OrthoFinder output from all 47 species
Cba_g13783 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Cba_g26615 SPL2 SBP-type transcription factor & original description: none 0.06 OrthoFinder output from all 47 species
Cba_g75896 SPL2 SBP-type transcription factor & original description: none 0.04 OrthoFinder output from all 47 species
Ceric.07G099600.1 SPL13, SPL13A,... SBP-type transcription factor & original description:... 0.04 OrthoFinder output from all 47 species
Ceric.12G034000.1 SPL13, SPL13A,... SBP-type transcription factor & original description:... 0.04 OrthoFinder output from all 47 species
Ceric.20G021600.1 SPL2, Ceric.20G021600 SBP-type transcription factor & original description:... 0.04 OrthoFinder output from all 47 species
Ceric.25G025600.1 SPL3, Ceric.25G025600 SBP-type transcription factor & original description:... 0.05 OrthoFinder output from all 47 species
Dac_g04690 SPL2 SBP-type transcription factor & original description: none 0.03 OrthoFinder output from all 47 species
Dcu_g13420 SPL3 SBP-type transcription factor & original description: none 0.03 OrthoFinder output from all 47 species
Dcu_g14928 SPL2 SBP-type transcription factor & original description: none 0.03 OrthoFinder output from all 47 species
Ehy_g23373 SPL3 SBP-type transcription factor & original description: none 0.04 OrthoFinder output from all 47 species
Ehy_g31810 SPL8 SBP-type transcription factor & original description: none 0.02 OrthoFinder output from all 47 species
GSVIVT01010522001 SPL13, SPL13A RNA biosynthesis.transcriptional activation.SBP... 0.02 OrthoFinder output from all 47 species
GSVIVT01018204001 No alias RNA biosynthesis.transcriptional activation.SBP... 0.03 OrthoFinder output from all 47 species
GSVIVT01018205001 SPL2 RNA biosynthesis.transcriptional activation.SBP... 0.02 OrthoFinder output from all 47 species
GSVIVT01033519001 AtSPL9, SPL9 RNA biosynthesis.transcriptional activation.SBP... 0.02 OrthoFinder output from all 47 species
LOC_Os02g08070.1 SPL8, LOC_Os02g08070 transcription factor (SBP) 0.02 OrthoFinder output from all 47 species
LOC_Os04g46580.1 SPL3, LOC_Os04g46580 transcription factor (SBP) 0.02 OrthoFinder output from all 47 species
LOC_Os06g44860.1 SPL8, LOC_Os06g44860 transcription factor (SBP) 0.03 OrthoFinder output from all 47 species
LOC_Os07g32170.1 SPL4, LOC_Os07g32170 transcription factor (SBP) 0.02 OrthoFinder output from all 47 species
LOC_Os09g32944.1 SPL13, SPL13A,... transcription factor (SBP) 0.05 OrthoFinder output from all 47 species
Len_g48733 SPL2 SBP-type transcription factor & original description: none 0.04 OrthoFinder output from all 47 species
Lfl_g17821 SPL3 SBP-type transcription factor & original description: none 0.03 OrthoFinder output from all 47 species
MA_10435426g0010 AtSPL9, SPL9 transcription factor (SBP) 0.02 OrthoFinder output from all 47 species
MA_3179g0020 SPL8 transcription factor (SBP) 0.02 OrthoFinder output from all 47 species
MA_92489g0010 SPL2 transcription factor (SBP) 0.03 OrthoFinder output from all 47 species
Mp1g10020.1 SPL8 transcription factor (SBP) 0.03 OrthoFinder output from all 47 species
Mp1g10030.1 SPL2 transcription factor (SBP) 0.05 OrthoFinder output from all 47 species
Msp_g03985 SPL2 SBP-type transcription factor & original description: none 0.04 OrthoFinder output from all 47 species
Msp_g08289 SPL3 SBP-type transcription factor & original description: none 0.03 OrthoFinder output from all 47 species
Msp_g12140 SPL2 SBP-type transcription factor & original description: none 0.03 OrthoFinder output from all 47 species
Msp_g16004 SPL2 SBP-type transcription factor & original description: none 0.05 OrthoFinder output from all 47 species
Msp_g32603 No alias SBP-type transcription factor & original description: none 0.03 OrthoFinder output from all 47 species
Nbi_g23336 SPL3 SBP-type transcription factor & original description: none 0.03 OrthoFinder output from all 47 species
Ore_g40775 SPL8 SBP-type transcription factor & original description: none 0.03 OrthoFinder output from all 47 species
Pir_g01646 AtSPL9, SPL9 SBP-type transcription factor & original description: none 0.04 OrthoFinder output from all 47 species
Pir_g45078 SPL7, ATSPL7 regulatory protein *(SPL7) of copper homeostasis &... 0.02 OrthoFinder output from all 47 species
Pnu_g23606 No alias SBP-type transcription factor & original description: none 0.03 OrthoFinder output from all 47 species
Ppi_g22224 SPL2 SBP-type transcription factor & original description: none 0.04 OrthoFinder output from all 47 species
Sacu_v1.1_s0032.g010846 SPL8 SBP-type transcription factor & original description:... 0.03 OrthoFinder output from all 47 species
Sacu_v1.1_s0109.g020524 SPL2 SBP-type transcription factor & original description: CDS=1-1641 0.03 OrthoFinder output from all 47 species
Sacu_v1.1_s0267.g026971 SPL8 SBP-type transcription factor & original description:... 0.03 OrthoFinder output from all 47 species
Sam_g14898 No alias SBP-type transcription factor & original description: none 0.04 OrthoFinder output from all 47 species
Sam_g30123 No alias SBP-type transcription factor & original description: none 0.02 OrthoFinder output from all 47 species
Sam_g48834 No alias SBP-type transcription factor & original description: none 0.03 OrthoFinder output from all 47 species
Solyc02g077920.4.1 SPL3, Solyc02g077920 transcription factor (SBP) 0.02 OrthoFinder output from all 47 species
Solyc05g015510.3.1 SPL2, Solyc05g015510 transcription factor (SBP) 0.02 OrthoFinder output from all 47 species
Solyc05g015840.3.1 SPL13, SPL13A,... transcription factor (SBP) 0.02 OrthoFinder output from all 47 species
Solyc07g053810.3.1 SPL3, Solyc07g053810 transcription factor (SBP) 0.03 OrthoFinder output from all 47 species
Solyc07g062980.4.1 SPL3, Solyc07g062980 transcription factor (SBP) 0.03 OrthoFinder output from all 47 species
Solyc10g018780.3.1 SPL8, Solyc10g018780 transcription factor (SBP) 0.02 OrthoFinder output from all 47 species
Tin_g14278 SPL8 SBP-type transcription factor & original description: none 0.04 OrthoFinder output from all 47 species
Tin_g32347 SPL2 SBP-type transcription factor & original description: none 0.03 OrthoFinder output from all 47 species
Zm00001e006686_P001 SPL8, Zm00001e006686 transcription factor (SBP) 0.02 OrthoFinder output from all 47 species
Zm00001e018817_P003 SPL13, SPL13A,... transcription factor (SBP) 0.04 OrthoFinder output from all 47 species
Zm00001e025110_P001 SPL8, Zm00001e025110 transcription factor (SBP) 0.02 OrthoFinder output from all 47 species
Zm00001e025234_P001 SPL2, Zm00001e025234 transcription factor (SBP) 0.03 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence

Type GO Term Name Evidence Source

No Predicted GO terms available for this sequence

No InterPro domains available for this sequence

No external refs found!