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  5. Cba_g06582

Cba_g06582


Description : not classified & original description: none


Gene families : OG0000043 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): No tree available for this family

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Cba_g06582

Target Alias Description ECC score Gene Family Method Actions
Adi_g007230 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Cba_g07704 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Cba_g20846 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Cba_g29993 VAC1, ECB2, ATECB2 not classified & original description: none 0.05 OrthoFinder output from all 47 species
Cba_g34892 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Cba_g67887 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Cba_g68863 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Cba_g75410 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ceric.32G031800.1 Ceric.32G031800 not classified & original description: pacid=50597829... 0.04 OrthoFinder output from all 47 species
Dde_g46291 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Len_g10365 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Len_g24004 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Len_g29842 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Lfl_g06175 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Lfl_g11913 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Msp_g37831 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Msp_g44488 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0030246 carbohydrate binding IEP HCCA
MF GO:0030247 polysaccharide binding IEP HCCA
MF GO:2001070 starch binding IEP HCCA
InterPro domains Description Start Stop
IPR002885 Pentatricopeptide_repeat 408 430
IPR002885 Pentatricopeptide_repeat 668 714
IPR002885 Pentatricopeptide_repeat 216 262
IPR002885 Pentatricopeptide_repeat 885 933
IPR002885 Pentatricopeptide_repeat 784 821
IPR002885 Pentatricopeptide_repeat 316 363
IPR002885 Pentatricopeptide_repeat 551 598
IPR002885 Pentatricopeptide_repeat 433 482
No external refs found!