Cba_g06470 (CDF2)

Aliases : CDF2

Description : transcription factor *(DOF) & original description: none

Gene families : OG0000067 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000067_tree

Sequence : coding (download), protein (download)

Attention: This gene has low abundance.

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	HRR: Cba_g06470
Cluster	HCCA: Cluster_11

Target	Alias	Description	ECC score	Gene Family Method
AMTR_s00006p00248860	TMO6,...	RNA biosynthesis.transcriptional activation.C2C2...	0.02	OrthoFinder output from all 47 species
AMTR_s00119p00099150	CDF2,...	RNA biosynthesis.transcriptional activation.C2C2...	0.04	OrthoFinder output from all 47 species
AT1G28310	No alias	Dof-type zinc finger DNA-binding family protein	0.03	OrthoFinder output from all 47 species
AT3G21270	ADOF2, DOF2	DOF zinc finger protein 2	0.03	OrthoFinder output from all 47 species
AT4G24060	No alias	Dof-type zinc finger DNA-binding family protein	0.02	OrthoFinder output from all 47 species
AT5G60200	TMO6	TARGET OF MONOPTEROS 6	0.03	OrthoFinder output from all 47 species
AT5G60850	OBP4	OBF binding protein 4	0.03	OrthoFinder output from all 47 species
Adi_g069664	OBP3	transcription factor *(DOF) & original description: none	0.03	OrthoFinder output from all 47 species
Ala_g38452	OBP4	transcription factor *(DOF) & original description: none	0.03	OrthoFinder output from all 47 species
Als_g03156	No alias	transcription factor *(DOF) & original description: none	0.04	OrthoFinder output from all 47 species
Als_g11020	CDF2	transcription factor *(DOF) & original description: none	0.02	OrthoFinder output from all 47 species
Aop_g14669	No alias	transcription factor *(DOF) & original description: none	0.03	OrthoFinder output from all 47 species
Aop_g18797	OBP3	transcription factor *(DOF) & original description: none	0.03	OrthoFinder output from all 47 species
Aop_g67430	TMO6	transcription factor *(DOF) & original description: none	0.04	OrthoFinder output from all 47 species
Aspi01Gene13553.t1	CDF3, Aspi01Gene13553	transcription factor *(DOF) & original description: none	0.03	OrthoFinder output from all 47 species
Aspi01Gene15304.t1	OBP4, Aspi01Gene15304	transcription factor *(DOF) & original description: none	0.03	OrthoFinder output from all 47 species
Aspi01Gene18959.t1	ADOF1, DOF1,...	transcription factor *(DOF) & original description: none	0.03	OrthoFinder output from all 47 species
Aspi01Gene26374.t1	Aspi01Gene26374	transcription factor *(DOF) & original description: none	0.03	OrthoFinder output from all 47 species
Aspi01Gene47016.t1	CDF2, Aspi01Gene47016	transcription factor *(DOF) & original description: none	0.03	OrthoFinder output from all 47 species
Azfi_s1074.g096912	TMO6	transcription factor *(DOF) & original description: CDS=1-1176	0.03	OrthoFinder output from all 47 species
GSVIVT01007992001	CDF1	RNA biosynthesis.transcriptional activation.C2C2...	0.03	OrthoFinder output from all 47 species
GSVIVT01021086001	No alias	RNA biosynthesis.transcriptional activation.C2C2...	0.04	OrthoFinder output from all 47 species
LOC_Os02g15350.1	LOC_Os02g15350	transcription factor (DOF)	0.02	OrthoFinder output from all 47 species
LOC_Os03g16850.1	OBP3, LOC_Os03g16850	transcription factor (DOF)	0.03	OrthoFinder output from all 47 species
LOC_Os07g32510.1	TMO6, LOC_Os07g32510	transcription factor (DOF)	0.02	OrthoFinder output from all 47 species
LOC_Os08g38220.1	LOC_Os08g38220	transcription factor (DOF)	0.03	OrthoFinder output from all 47 species
Lfl_g27554	TMO6	transcription factor *(DOF) & original description: none	0.03	OrthoFinder output from all 47 species
Msp_g11443	No alias	transcription factor *(DOF) & original description: none	0.03	OrthoFinder output from all 47 species
Msp_g20658	TMO6	transcription factor *(DOF) & original description: none	0.03	OrthoFinder output from all 47 species
Msp_g32354	TMO6	transcription factor *(DOF) & original description: none	0.04	OrthoFinder output from all 47 species
Ore_g25217	OBP4	transcription factor *(DOF) & original description: none	0.03	OrthoFinder output from all 47 species
Ore_g33176	No alias	transcription factor *(DOF) & original description: none	0.03	OrthoFinder output from all 47 species
Pir_g19390	TMO6	transcription factor *(DOF) & original description: none	0.03	OrthoFinder output from all 47 species
Pnu_g26562	CDF2	transcription factor *(DOF) & original description: none	0.03	OrthoFinder output from all 47 species
Ppi_g06804	No alias	not classified & original description: none	0.04	OrthoFinder output from all 47 species
Ppi_g07474	TMO6	transcription factor *(DOF) & original description: none	0.03	OrthoFinder output from all 47 species
Ppi_g11469	ADOF1, DOF1	transcription factor *(DOF) & original description: none	0.02	OrthoFinder output from all 47 species
Ppi_g16493	CDF3	transcription factor *(DOF) & original description: none	0.03	OrthoFinder output from all 47 species
Solyc02g077950.3.1	Solyc02g077950	transcription factor (DOF)	0.02	OrthoFinder output from all 47 species
Solyc02g077960.3.1	TMO6, Solyc02g077960	transcription factor (DOF)	0.02	OrthoFinder output from all 47 species
Solyc02g090220.3.1	OBP1, Solyc02g090220	transcription factor (DOF)	0.02	OrthoFinder output from all 47 species
Solyc03g082840.3.1	DAG1, Solyc03g082840	transcription factor (DOF)	0.05	OrthoFinder output from all 47 species
Solyc10g009360.4.1	DAG1, Solyc10g009360	transcription factor (DOF)	0.04	OrthoFinder output from all 47 species
Spa_g41104	CDF3	transcription factor *(DOF) & original description: none	0.04	OrthoFinder output from all 47 species
Tin_g28492	CDF2	transcription factor *(DOF) & original description: none	0.05	OrthoFinder output from all 47 species
Zm00001e001988_P001	TMO6, Zm00001e001988	transcription factor (DOF)	0.02	OrthoFinder output from all 47 species
Zm00001e003414_P001	OBP1, Zm00001e003414	transcription factor (DOF)	0.03	OrthoFinder output from all 47 species
Zm00001e007228_P002	Zm00001e007228	transcription factor (DOF)	0.03	OrthoFinder output from all 47 species
Zm00001e010454_P001	TMO6, Zm00001e010454	transcription factor (DOF)	0.02	OrthoFinder output from all 47 species
Zm00001e011750_P002	Zm00001e011750	transcription factor (DOF)	0.03	OrthoFinder output from all 47 species
Zm00001e017319_P001	CDF2, Zm00001e017319	transcription factor (DOF)	0.02	OrthoFinder output from all 47 species
Zm00001e019172_P001	Zm00001e019172	transcription factor (DOF)	0.03	OrthoFinder output from all 47 species
Zm00001e027634_P002	OBP3, Zm00001e027634	transcription factor (DOF)	0.02	OrthoFinder output from all 47 species
Zm00001e028042_P002	Zm00001e028042	no hits & (original description: none)	0.02	OrthoFinder output from all 47 species

Type	GO Term	Name	Evidence	Source
MF	GO:0003674	molecular_function	None	Extended
MF	GO:0003676	nucleic acid binding	None	Extended
MF	GO:0003677	DNA binding	IEA	Interproscan
MF	GO:0005488	binding	None	Extended
BP	GO:0006355	regulation of DNA-templated transcription	IEA	Interproscan
BP	GO:0008150	biological_process	None	Extended
BP	GO:0009889	regulation of biosynthetic process	None	Extended
BP	GO:0010468	regulation of gene expression	None	Extended
BP	GO:0010556	regulation of macromolecule biosynthetic process	None	Extended
BP	GO:0019219	regulation of nucleobase-containing compound metabolic process	None	Extended
BP	GO:0019222	regulation of metabolic process	None	Extended
BP	GO:0031323	regulation of cellular metabolic process	None	Extended
BP	GO:0031326	regulation of cellular biosynthetic process	None	Extended
BP	GO:0050789	regulation of biological process	None	Extended
BP	GO:0050794	regulation of cellular process	None	Extended
BP	GO:0051171	regulation of nitrogen compound metabolic process	None	Extended
BP	GO:0051252	regulation of RNA metabolic process	None	Extended
BP	GO:0060255	regulation of macromolecule metabolic process	None	Extended
BP	GO:0065007	biological regulation	None	Extended
BP	GO:0080090	regulation of primary metabolic process	None	Extended
MF	GO:0097159	organic cyclic compound binding	None	Extended
MF	GO:1901363	heterocyclic compound binding	None	Extended
BP	GO:1903506	regulation of nucleic acid-templated transcription	None	Extended
BP	GO:2001141	regulation of RNA biosynthetic process	None	Extended

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Type	GO Term	Name	Evidence	Source
No Predicted GO terms available for this sequence

InterPro domains	Description	Start	Stop
IPR003851	Znf_Dof	139	195

External Links

No external refs found!

Cba_g06470 (CDF2)

Expression Profile

Co-expression Networks

Expression Context Conservation (ECC)

Functional Annotation