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  5. Cba_g06445

Cba_g06445 (PIRL4)


Aliases : PIRL4

Description : not classified & original description: none


Gene families : OG0002720 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0002720_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Cba_g06445
Cluster HCCA: Cluster_24

Target Alias Description ECC score Gene Family Method Actions
AT4G35470 PIRL4 plant intracellular ras group-related LRR 4 0.02 OrthoFinder output from all 47 species
LOC_Os08g40090.1 PIRL4, LOC_Os08g40090 Plant intracellular Ras-group-related LRR protein 4... 0.01 OrthoFinder output from all 47 species
Sam_g40007 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Solyc08g006970.4.1 PIRL5, Solyc08g006970 Plant intracellular Ras-group-related LRR protein 5... 0.02 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0005515 protein binding IEA Interproscan
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Type GO Term Name Evidence Source
CC GO:0000439 transcription factor TFIIH core complex IEP HCCA
MF GO:0003682 chromatin binding IEP HCCA
CC GO:0005667 transcription regulator complex IEP HCCA
BP GO:0006259 DNA metabolic process IEP HCCA
BP GO:0006281 DNA repair IEP HCCA
BP GO:0006289 nucleotide-excision repair IEP HCCA
BP GO:0006950 response to stress IEP HCCA
BP GO:0006974 cellular response to DNA damage stimulus IEP HCCA
MF GO:0008092 cytoskeletal protein binding IEP HCCA
MF GO:0015631 tubulin binding IEP HCCA
BP GO:0033554 cellular response to stress IEP HCCA
MF GO:0043015 gamma-tubulin binding IEP HCCA
BP GO:0051716 cellular response to stimulus IEP HCCA
CC GO:0090575 RNA polymerase II transcription regulator complex IEP HCCA
CC GO:0140513 nuclear protein-containing complex IEP HCCA
InterPro domains Description Start Stop
IPR001611 Leu-rich_rpt 280 337
IPR001611 Leu-rich_rpt 395 454
No external refs found!