Cba_g06419


Description : not classified & original description: none


Gene families : OG0002005 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0002005_tree

Sequence : coding (download), protein (download)


Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Cba_g06419

Target Alias Description ECC score Gene Family Method Actions
AT1G16320 No alias Uncharacterized conserved protein (DUF2358) 0.02 OrthoFinder output from all 47 species
Ala_g18668 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aob_g28607 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Aop_g05920 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Ceric.03G031300.1 Ceric.03G031300 not classified & original description: pacid=50572886... 0.04 OrthoFinder output from all 47 species
Ceric.07G081200.1 Ceric.07G081200 not classified & original description: pacid=50628006... 0.05 OrthoFinder output from all 47 species
Cpa|evm.model.tig00000802.28 No alias No description available 0.01 OrthoFinder output from all 47 species
Dac_g10250 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Len_g01084 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Lfl_g03130 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
MA_930475g0010 No alias no hits & (original description: none) 0.03 OrthoFinder output from all 47 species
Ore_g10873 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Pir_g59584 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Pnu_g27084 No alias not classified & original description: none 0.07 OrthoFinder output from all 47 species
Ppi_g29744 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Sam_g10895 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Sam_g15153 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Spa_g21518 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Zm00001e006957_P001 Zm00001e006957 no hits & (original description: none) 0.02 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence

Type GO Term Name Evidence Source
MF GO:0003674 molecular_function IEP HCCA
MF GO:0003690 double-stranded DNA binding IEP HCCA
MF GO:0005488 binding IEP HCCA
BP GO:0006355 regulation of DNA-templated transcription IEP HCCA
MF GO:0008113 peptide-methionine (S)-S-oxide reductase activity IEP HCCA
MF GO:0008270 zinc ion binding IEP HCCA
BP GO:0009889 regulation of biosynthetic process IEP HCCA
BP GO:0010468 regulation of gene expression IEP HCCA
BP GO:0010556 regulation of macromolecule biosynthetic process IEP HCCA
MF GO:0015930 glutamate synthase activity IEP HCCA
MF GO:0016491 oxidoreductase activity IEP HCCA
MF GO:0016638 oxidoreductase activity, acting on the CH-NH2 group of donors IEP HCCA
MF GO:0016667 oxidoreductase activity, acting on a sulfur group of donors IEP HCCA
MF GO:0016671 oxidoreductase activity, acting on a sulfur group of donors, disulfide as acceptor IEP HCCA
BP GO:0019219 regulation of nucleobase-containing compound metabolic process IEP HCCA
BP GO:0031326 regulation of cellular biosynthetic process IEP HCCA
MF GO:0043167 ion binding IEP HCCA
MF GO:0050660 flavin adenine dinucleotide binding IEP HCCA
BP GO:0051252 regulation of RNA metabolic process IEP HCCA
MF GO:0071949 FAD binding IEP HCCA
MF GO:0097159 organic cyclic compound binding IEP HCCA
MF GO:1901363 heterocyclic compound binding IEP HCCA
BP GO:1903506 regulation of nucleic acid-templated transcription IEP HCCA
BP GO:2001141 regulation of RNA biosynthetic process IEP HCCA
InterPro domains Description Start Stop
IPR018790 DUF2358 174 284
No external refs found!