Cba_g06338


Description : not classified & original description: none


Gene families : OG0000811 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000811_tree

Sequence : coding (download), protein (download)


Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Cba_g06338

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00028p00153320 evm_27.TU.AmTr_v1... CASP-like protein 2B1 OS=Vitis vinifera 0.03 OrthoFinder output from all 47 species
AMTR_s00037p00155660 evm_27.TU.AmTr_v1... CASP-like protein 2D1 OS=Vitis vinifera 0.02 OrthoFinder output from all 47 species
AMTR_s00131p00032340 evm_27.TU.AmTr_v1... CASP-like protein 2A1 OS=Oryza sativa subsp. japonica 0.02 OrthoFinder output from all 47 species
AT4G16442 No alias Uncharacterised protein family (UPF0497) 0.02 OrthoFinder output from all 47 species
AT5G54980 No alias Uncharacterised protein family (UPF0497) 0.02 OrthoFinder output from all 47 species
Als_g03502 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ceric.23G007900.1 Ceric.23G007900 not classified & original description: pacid=50611019... 0.03 OrthoFinder output from all 47 species
Ehy_g00472 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
GSVIVT01010256001 No alias CASP-like protein 2A1 OS=Vitis vinifera 0.02 OrthoFinder output from all 47 species
LOC_Os04g21320.1 LOC_Os04g21320 CASP-like protein 2A1 OS=Oryza sativa subsp. indica... 0.02 OrthoFinder output from all 47 species
MA_286708g0010 No alias CASP-like protein 2A2 OS=Picea sitchensis... 0.02 OrthoFinder output from all 47 species
Ore_g39866 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Sam_g02059 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Solyc07g056040.3.1 Solyc07g056040 CASP-like protein 2A1 OS=Vitis vinifera... 0.02 OrthoFinder output from all 47 species
Solyc11g012590.3.1 Solyc11g012590 CASP-like protein 2B1 OS=Ricinus communis... 0.03 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence

Type GO Term Name Evidence Source
MF GO:0003674 molecular_function IEP HCCA
MF GO:0005488 binding IEP HCCA
MF GO:0005515 protein binding IEP HCCA
MF GO:0008237 metallopeptidase activity IEP HCCA
CC GO:0016020 membrane IEP HCCA
InterPro domains Description Start Stop
IPR006702 CASP_dom 40 192
No external refs found!