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  5. Cba_g06275

Cba_g06275


Description : photosynthetic acclimation MPH2 acclimation factor & original description: none


Gene families : OG0005156 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0005156_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Cba_g06275
Cluster HCCA: Cluster_288

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00024p00252900 evm_27.TU.AmTr_v1... Photosynthesis.photophosphorylation.photosystem... 0.06 OrthoFinder output from all 47 species
AT4G02530 No alias chloroplast thylakoid lumen protein 0.07 OrthoFinder output from all 47 species
Adi_g017251 No alias photosynthetic acclimation MPH2 acclimation factor &... 0.06 OrthoFinder output from all 47 species
Aev_g48150 No alias photosynthetic acclimation MPH2 acclimation factor &... 0.03 OrthoFinder output from all 47 species
Aob_g09254 No alias photosynthetic acclimation MPH2 acclimation factor &... 0.05 OrthoFinder output from all 47 species
Aop_g06470 No alias photosynthetic acclimation MPH2 acclimation factor &... 0.04 OrthoFinder output from all 47 species
Aspi01Gene55410.t1 Aspi01Gene55410 photosynthetic acclimation MPH2 acclimation factor &... 0.05 OrthoFinder output from all 47 species
Azfi_s0006.g010005 No alias photosynthetic acclimation MPH2 acclimation factor &... 0.05 OrthoFinder output from all 47 species
Ceric.30G065600.1 Ceric.30G065600 photosynthetic acclimation MPH2 acclimation factor &... 0.07 OrthoFinder output from all 47 species
Dac_g10226 No alias photosynthetic acclimation MPH2 acclimation factor &... 0.06 OrthoFinder output from all 47 species
Dde_g10042 No alias photosynthetic acclimation MPH2 acclimation factor &... 0.06 OrthoFinder output from all 47 species
Ehy_g00658 No alias photosynthetic acclimation MPH2 acclimation factor &... 0.08 OrthoFinder output from all 47 species
GSVIVT01015564001 No alias Photosynthesis.photophosphorylation.photosystem... 0.09 OrthoFinder output from all 47 species
Gb_39226 No alias photosynthetic acclimation MPH2 acclimation factor 0.02 OrthoFinder output from all 47 species
LOC_Os06g49160.1 LOC_Os06g49160 photosynthetic acclimation MPH2 acclimation factor 0.08 OrthoFinder output from all 47 species
Len_g35740 No alias photosynthetic acclimation MPH2 acclimation factor &... 0.11 OrthoFinder output from all 47 species
Lfl_g12575 No alias photosynthetic acclimation MPH2 acclimation factor &... 0.04 OrthoFinder output from all 47 species
MA_4765g0010 No alias photosynthetic acclimation MPH2 acclimation factor 0.03 OrthoFinder output from all 47 species
Mp7g01620.1 No alias photosynthetic acclimation MPH2 acclimation factor 0.08 OrthoFinder output from all 47 species
Ore_g45036 No alias photosynthetic acclimation MPH2 acclimation factor &... 0.09 OrthoFinder output from all 47 species
Pir_g00352 No alias photosynthetic acclimation MPH2 acclimation factor &... 0.05 OrthoFinder output from all 47 species
Pnu_g08287 No alias photosynthetic acclimation MPH2 acclimation factor &... 0.07 OrthoFinder output from all 47 species
Ppi_g01764 No alias photosynthetic acclimation MPH2 acclimation factor &... 0.03 OrthoFinder output from all 47 species
Sacu_v1.1_s0235.g026539 No alias photosynthetic acclimation MPH2 acclimation factor &... 0.08 OrthoFinder output from all 47 species
Smo412250 No alias Photosynthesis.photophosphorylation.photosystem... 0.06 OrthoFinder output from all 47 species
Spa_g00880 No alias photosynthetic acclimation MPH2 acclimation factor &... 0.04 OrthoFinder output from all 47 species
Zm00001e013209_P001 Zm00001e013209 photosynthetic acclimation MPH2 acclimation factor 0.05 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0003674 molecular_function IEP HCCA
MF GO:0004089 carbonate dehydratase activity IEP HCCA
MF GO:0005509 calcium ion binding IEP HCCA
BP GO:0006778 porphyrin-containing compound metabolic process IEP HCCA
BP GO:0006779 porphyrin-containing compound biosynthetic process IEP HCCA
MF GO:0008168 methyltransferase activity IEP HCCA
MF GO:0008171 O-methyltransferase activity IEP HCCA
MF GO:0008757 S-adenosylmethionine-dependent methyltransferase activity IEP HCCA
CC GO:0009521 photosystem IEP HCCA
CC GO:0009523 photosystem II IEP HCCA
CC GO:0009654 photosystem II oxygen evolving complex IEP HCCA
BP GO:0009987 cellular process IEP HCCA
BP GO:0015979 photosynthesis IEP HCCA
BP GO:0015994 chlorophyll metabolic process IEP HCCA
BP GO:0015995 chlorophyll biosynthetic process IEP HCCA
MF GO:0016209 antioxidant activity IEP HCCA
MF GO:0016491 oxidoreductase activity IEP HCCA
MF GO:0016741 transferase activity, transferring one-carbon groups IEP HCCA
MF GO:0016835 carbon-oxygen lyase activity IEP HCCA
MF GO:0016836 hydro-lyase activity IEP HCCA
CC GO:0019898 extrinsic component of membrane IEP HCCA
CC GO:0032991 protein-containing complex IEP HCCA
BP GO:0033013 tetrapyrrole metabolic process IEP HCCA
BP GO:0033014 tetrapyrrole biosynthetic process IEP HCCA
BP GO:0042440 pigment metabolic process IEP HCCA
MF GO:0043169 cation binding IEP HCCA
BP GO:0046148 pigment biosynthetic process IEP HCCA
MF GO:0046406 magnesium protoporphyrin IX methyltransferase activity IEP HCCA
MF GO:0046872 metal ion binding IEP HCCA
CC GO:0098796 membrane protein complex IEP HCCA
CC GO:1902494 catalytic complex IEP HCCA
CC GO:1990204 oxidoreductase complex IEP HCCA

No InterPro domains available for this sequence

No external refs found!