Cba_g06214


Description : not classified & original description: none


Gene families : OG0001043 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0001043_tree

Sequence : coding (download), protein (download)


Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Cba_g06214
Cluster HCCA: Cluster_13

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00858p00001360 evm_27.TU.AmTr_v1... No description available 0.02 OrthoFinder output from all 47 species
Adi_g007335 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Adi_g007336 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Adi_g050187 No alias not classified & original description: none 0.06 OrthoFinder output from all 47 species
Adi_g088301 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Adi_g116822 No alias not classified & original description: none 0.07 OrthoFinder output from all 47 species
Adi_g116823 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Als_g00397 No alias not classified & original description: none 0.08 OrthoFinder output from all 47 species
Als_g04302 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Als_g09555 No alias not classified & original description: none 0.06 OrthoFinder output from all 47 species
Als_g12595 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Als_g24247 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Aop_g04142 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Aop_g05496 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Aspi01Gene06254.t1 Aspi01Gene06254 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aspi01Gene23243.t1 Aspi01Gene23243 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aspi01Gene28876.t1 Aspi01Gene28876 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aspi01Gene41347.t1 Aspi01Gene41347 not classified & original description: none 0.06 OrthoFinder output from all 47 species
Aspi01Gene54373.t1 Aspi01Gene54373 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aspi01Gene56111.t1 Aspi01Gene56111 not classified & original description: none 0.04 OrthoFinder output from all 47 species
Aspi01Gene69388.t1 Aspi01Gene69388 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aspi01Gene71674.t1 Aspi01Gene71674 not classified & original description: none 0.08 OrthoFinder output from all 47 species
Azfi_s0090.g042790 No alias not classified & original description: CDS=188-1138 0.03 OrthoFinder output from all 47 species
Cba_g16161 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ceric.09G029500.1 Ceric.09G029500 not classified & original description: pacid=50587700... 0.03 OrthoFinder output from all 47 species
Ceric.09G029600.1 Ceric.09G029600 not classified & original description: pacid=50588127... 0.03 OrthoFinder output from all 47 species
Ceric.09G029900.1 Ceric.09G029900 not classified & original description: pacid=50587789... 0.04 OrthoFinder output from all 47 species
Ceric.09G030100.1 Ceric.09G030100 not classified & original description: pacid=50587319... 0.03 OrthoFinder output from all 47 species
Ceric.09G030300.1 Ceric.09G030300 not classified & original description: pacid=50587070... 0.03 OrthoFinder output from all 47 species
Ceric.09G030500.1 Ceric.09G030500 not classified & original description: pacid=50588149... 0.03 OrthoFinder output from all 47 species
Ceric.09G031000.1 Ceric.09G031000 not classified & original description: pacid=50588455... 0.03 OrthoFinder output from all 47 species
Ceric.09G031100.1 Ceric.09G031100 not classified & original description: pacid=50587047... 0.03 OrthoFinder output from all 47 species
Ceric.13G022300.1 Ceric.13G022300 not classified & original description: pacid=50635736... 0.02 OrthoFinder output from all 47 species
Dac_g07202 No alias not classified & original description: none 0.07 OrthoFinder output from all 47 species
Dac_g07203 No alias not classified & original description: none 0.07 OrthoFinder output from all 47 species
Dcu_g02335 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Dcu_g35615 No alias not classified & original description: none 0.08 OrthoFinder output from all 47 species
Dcu_g43905 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Dde_g16848 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Dde_g28301 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Dde_g46939 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Ehy_g09543 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ehy_g09544 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ehy_g13225 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Ehy_g13226 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ehy_g13696 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ehy_g15103 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
LOC_Os01g10490.1 LOC_Os01g10490 no hits & (original description: none) 0.03 OrthoFinder output from all 47 species
LOC_Os02g13660.1 LOC_Os02g13660 Protodermal factor 1 OS=Arabidopsis thaliana... 0.02 OrthoFinder output from all 47 species
LOC_Os04g43670.1 LOC_Os04g43670 no hits & (original description: none) 0.03 OrthoFinder output from all 47 species
LOC_Os06g35970.1 LOC_Os06g35970 Protodermal factor 1 OS=Arabidopsis thaliana... 0.02 OrthoFinder output from all 47 species
Len_g39833 PDF1 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Len_g51187 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Len_g55644 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Lfl_g24985 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
MA_111671g0010 No alias no hits & (original description: none) 0.02 OrthoFinder output from all 47 species
Mp3g10620.1 No alias no hits & (original description: none) 0.06 OrthoFinder output from all 47 species
Msp_g11807 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ore_g26532 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Ore_g26786 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ore_g39776 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Pp3c3_2630V3.1 Pp3c3_2630 No annotation 0.01 OrthoFinder output from all 47 species
Ppi_g11102 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Ppi_g57949 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Ppi_g59815 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ppi_g60945 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Sacu_v1.1_s0032.g010928 No alias not classified & original description: CDS=1-1425 0.05 OrthoFinder output from all 47 species
Sacu_v1.1_s0034.g011225 No alias not classified & original description: CDS=1-924 0.03 OrthoFinder output from all 47 species
Sacu_v1.1_s0044.g013066 No alias not classified & original description: CDS=357-1112 0.02 OrthoFinder output from all 47 species
Smo437656 No alias No description available 0.02 OrthoFinder output from all 47 species
Solyc06g083880.2.1 Solyc06g083880 no hits & (original description: none) 0.03 OrthoFinder output from all 47 species
Solyc07g055950.3.1 PDF1, Solyc07g055950 Protodermal factor 1 OS=Arabidopsis thaliana... 0.02 OrthoFinder output from all 47 species
Solyc12g011010.2.1 PDF1, Solyc12g011010 Protodermal factor 1 OS=Arabidopsis thaliana... 0.03 OrthoFinder output from all 47 species
Spa_g51109 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Spa_g51721 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Tin_g45104 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Zm00001e007610_P001 Zm00001e007610 no hits & (original description: none) 0.02 OrthoFinder output from all 47 species
Zm00001e014410_P001 PDF1, Zm00001e014410 Protodermal factor 1 OS=Arabidopsis thaliana... 0.02 OrthoFinder output from all 47 species
Zm00001e016528_P003 Zm00001e016528 no hits & (original description: none) 0.02 OrthoFinder output from all 47 species
Zm00001e019923_P004 PDF1, Zm00001e019923 Protodermal factor 1 OS=Arabidopsis thaliana... 0.04 OrthoFinder output from all 47 species
Zm00001e030674_P001 Zm00001e030674 no hits & (original description: none) 0.04 OrthoFinder output from all 47 species
Zm00001e030749_P002 Zm00001e030749 no hits & (original description: none) 0.05 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence

Type GO Term Name Evidence Source
BP GO:0000271 polysaccharide biosynthetic process IEP HCCA
MF GO:0003824 catalytic activity IEP HCCA
MF GO:0004601 peroxidase activity IEP HCCA
MF GO:0005507 copper ion binding IEP HCCA
BP GO:0005975 carbohydrate metabolic process IEP HCCA
BP GO:0005976 polysaccharide metabolic process IEP HCCA
BP GO:0006073 cellular glucan metabolic process IEP HCCA
BP GO:0006979 response to oxidative stress IEP HCCA
BP GO:0008150 biological_process IEP HCCA
MF GO:0008194 UDP-glycosyltransferase activity IEP HCCA
BP GO:0008610 lipid biosynthetic process IEP HCCA
BP GO:0009058 biosynthetic process IEP HCCA
BP GO:0009250 glucan biosynthetic process IEP HCCA
BP GO:0016051 carbohydrate biosynthetic process IEP HCCA
MF GO:0016491 oxidoreductase activity IEP HCCA
MF GO:0016684 oxidoreductase activity, acting on peroxide as acceptor IEP HCCA
MF GO:0016740 transferase activity IEP HCCA
MF GO:0016757 glycosyltransferase activity IEP HCCA
MF GO:0016758 hexosyltransferase activity IEP HCCA
MF GO:0016759 cellulose synthase activity IEP HCCA
MF GO:0016760 cellulose synthase (UDP-forming) activity IEP HCCA
BP GO:0030243 cellulose metabolic process IEP HCCA
BP GO:0030244 cellulose biosynthetic process IEP HCCA
BP GO:0033692 cellular polysaccharide biosynthetic process IEP HCCA
BP GO:0034637 cellular carbohydrate biosynthetic process IEP HCCA
MF GO:0035251 UDP-glucosyltransferase activity IEP HCCA
BP GO:0044042 glucan metabolic process IEP HCCA
BP GO:0044238 primary metabolic process IEP HCCA
BP GO:0044262 cellular carbohydrate metabolic process IEP HCCA
BP GO:0044264 cellular polysaccharide metabolic process IEP HCCA
MF GO:0046527 glucosyltransferase activity IEP HCCA
MF GO:0046914 transition metal ion binding IEP HCCA
BP GO:0051273 beta-glucan metabolic process IEP HCCA
BP GO:0051274 beta-glucan biosynthetic process IEP HCCA
BP GO:0071704 organic substance metabolic process IEP HCCA
BP GO:1901576 organic substance biosynthetic process IEP HCCA

No InterPro domains available for this sequence

No external refs found!