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  5. Cba_g05954

Cba_g05954


Description : not classified & original description: none


Gene families : OG0000234 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000234_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Cba_g05954

Target Alias Description ECC score Gene Family Method Actions
Azfi_s0013.g013224 No alias not classified & original description: CDS=1-3375 0.03 OrthoFinder output from all 47 species
Ceric.04G011700.1 RPL10B, Ceric.04G011700 not classified & original description: pacid=50630755... 0.03 OrthoFinder output from all 47 species
Dac_g13673 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Gb_30312 No alias no description available(sp|q9m2r0|ftip3_arath : 1280.0) 0.02 OrthoFinder output from all 47 species
Sacu_v1.1_s0087.g018526 No alias not classified & original description: CDS=1-3183 0.03 OrthoFinder output from all 47 species
Solyc08g008020.1.1 Solyc08g008020 no description available(sp|q9m2r0|ftip3_arath : 1152.0) 0.02 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0004842 ubiquitin-protein transferase activity IEP HCCA
MF GO:0019787 ubiquitin-like protein transferase activity IEP HCCA
MF GO:0061630 ubiquitin protein ligase activity IEP HCCA
MF GO:0061659 ubiquitin-like protein ligase activity IEP HCCA
MF GO:0140096 catalytic activity, acting on a protein IEP HCCA
InterPro domains Description Start Stop
IPR013583 PRibTrfase_C 809 964
IPR000008 C2_dom 221 315
IPR000008 C2_dom 377 486
IPR000008 C2_dom 553 664
IPR000008 C2_dom 5 95
No external refs found!