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  5. Cba_g05694

Cba_g05694 (RIN4)


Aliases : RIN4

Description : regulatory factor *(RIN4) guarded by RPM1/RPS2 activities & original description: none


Gene families : OG0000509 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000509_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Cba_g05694

Target Alias Description ECC score Gene Family Method Actions
Azfi_s0061.g034954 No alias not classified & original description: CDS=1-828 0.03 OrthoFinder output from all 47 species
Ceric.18G072000.1 Ceric.18G072000 not classified & original description: pacid=50621871... 0.03 OrthoFinder output from all 47 species
GSVIVT01014701001 No alias No description available 0.02 OrthoFinder output from all 47 species
Mp1g26110.1 No alias no hits & (original description: none) 0.01 OrthoFinder output from all 47 species
Ore_g44847 No alias regulatory factor *(RIN4) guarded by RPM1/RPS2... 0.02 OrthoFinder output from all 47 species
Pir_g02195 RIN4 regulatory factor *(RIN4) guarded by RPM1/RPS2... 0.03 OrthoFinder output from all 47 species
Pnu_g05945 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Ppi_g61445 NOI not classified & original description: none 0.02 OrthoFinder output from all 47 species
Tin_g28383 RIN4 regulatory factor *(RIN4) guarded by RPM1/RPS2... 0.02 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0000166 nucleotide binding IEP HCCA
MF GO:0003674 molecular_function IEP HCCA
MF GO:0004497 monooxygenase activity IEP HCCA
MF GO:0005488 binding IEP HCCA
MF GO:0005506 iron ion binding IEP HCCA
CC GO:0005759 mitochondrial matrix IEP HCCA
MF GO:0016705 oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen IEP HCCA
MF GO:0016887 ATP hydrolysis activity IEP HCCA
MF GO:0017076 purine nucleotide binding IEP HCCA
MF GO:0020037 heme binding IEP HCCA
CC GO:0031974 membrane-enclosed lumen IEP HCCA
MF GO:0032553 ribonucleotide binding IEP HCCA
MF GO:0032555 purine ribonucleotide binding IEP HCCA
MF GO:0035639 purine ribonucleoside triphosphate binding IEP HCCA
MF GO:0036094 small molecule binding IEP HCCA
MF GO:0043167 ion binding IEP HCCA
MF GO:0043168 anion binding IEP HCCA
CC GO:0043233 organelle lumen IEP HCCA
MF GO:0046906 tetrapyrrole binding IEP HCCA
CC GO:0070013 intracellular organelle lumen IEP HCCA
MF GO:0097159 organic cyclic compound binding IEP HCCA
MF GO:0097367 carbohydrate derivative binding IEP HCCA
MF GO:1901265 nucleoside phosphate binding IEP HCCA
MF GO:1901363 heterocyclic compound binding IEP HCCA
InterPro domains Description Start Stop
IPR008700 TypeIII_avirulence_cleave 203 239
IPR008700 TypeIII_avirulence_cleave 5 34
No external refs found!