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Aliases : VAC1, ECB2, ATECB2
Description : not classified & original description: none
Gene families : OG0000000 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): No tree available for this family
Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.
| Target | Alias | Description | ECC score | Gene Family Method | Actions |
|---|---|---|---|---|---|
| AMTR_s00061p00035580 | No alias | Pentatricopeptide repeat-containing protein At5g44230... | 0.03 | OrthoFinder output from all 47 species | |
| Adi_g067784 | No alias | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Adi_g074695 | No alias | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Aev_g30904 | No alias | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Ala_g22769 | No alias | not classified & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| Als_g04216 | No alias | not classified & original description: none | 0.04 | OrthoFinder output from all 47 species | |
| Als_g04425 | EMB2758 | not classified & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| Als_g05568 | No alias | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Als_g06136 | CRR2 | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Als_g07386 | No alias | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Als_g07490 | No alias | not classified & original description: none | 0.05 | OrthoFinder output from all 47 species | |
| Als_g14743 | No alias | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Als_g14757 | No alias | not classified & original description: none | 0.05 | OrthoFinder output from all 47 species | |
| Als_g15782 | OTP86 | not classified & original description: none | 0.04 | OrthoFinder output from all 47 species | |
| Als_g16068 | No alias | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Als_g18452 | No alias | not classified & original description: none | 0.04 | OrthoFinder output from all 47 species | |
| Als_g19046 | OTP86 | not classified & original description: none | 0.04 | OrthoFinder output from all 47 species | |
| Als_g38840 | No alias | not classified & original description: none | 0.04 | OrthoFinder output from all 47 species | |
| Aop_g16640 | No alias | not classified & original description: none | 0.04 | OrthoFinder output from all 47 species | |
| Aop_g25847 | No alias | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Aspi01Gene56416.t1 | CRR22, Aspi01Gene56416 | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Aspi01Gene65846.t1 | OSB3, Aspi01Gene65846 | ssDNA-binding protein *(OSB) & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Cba_g02684 | No alias | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Cba_g06120 | No alias | not classified & original description: none | 0.05 | OrthoFinder output from all 47 species | |
| Cba_g12399 | DOT4 | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Cba_g15323 | No alias | not classified & original description: none | 0.05 | OrthoFinder output from all 47 species | |
| Cba_g29885 | CRR2 | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Ceric.22G050700.1 | Ceric.22G050700 | not classified & original description: pacid=50614024... | 0.03 | OrthoFinder output from all 47 species | |
| Cpa|evm.model.tig00021035.24 | No alias | Pentatricopeptide repeat-containing protein At1g63080,... | 0.01 | OrthoFinder output from all 47 species | |
| Dac_g23403 | No alias | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Dcu_g08698 | EMB2744 | not classified & original description: none | 0.04 | OrthoFinder output from all 47 species | |
| Dcu_g36401 | OTP86 | not classified & original description: none | 0.04 | OrthoFinder output from all 47 species | |
| Dde_g06677 | No alias | not classified & original description: none | 0.04 | OrthoFinder output from all 47 species | |
| Dde_g21324 | No alias | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Ehy_g13294 | No alias | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| GSVIVT01010898001 | No alias | Pentatricopeptide repeat-containing protein At2g34400... | 0.04 | OrthoFinder output from all 47 species | |
| Gb_12832 | No alias | Pentatricopeptide repeat-containing protein At2g13600... | 0.04 | OrthoFinder output from all 47 species | |
| LOC_Os11g01836.1 | LOC_Os11g01836 | Putative pentatricopeptide repeat-containing protein... | 0.05 | OrthoFinder output from all 47 species | |
| Len_g03276 | No alias | not classified & original description: none | 0.05 | OrthoFinder output from all 47 species | |
| Len_g04340 | EMB2758 | not classified & original description: none | 0.04 | OrthoFinder output from all 47 species | |
| Len_g05370 | CRR22 | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Len_g19018 | No alias | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Len_g24813 | No alias | not classified & original description: none | 0.04 | OrthoFinder output from all 47 species | |
| Len_g34154 | No alias | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Len_g39568 | No alias | not classified & original description: none | 0.04 | OrthoFinder output from all 47 species | |
| Lfl_g07821 | No alias | not classified & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| Lfl_g08759 | No alias | not classified & original description: none | 0.04 | OrthoFinder output from all 47 species | |
| Lfl_g14946 | No alias | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Lfl_g35996 | OTP86 | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| MA_10427854g0020 | No alias | Pentatricopeptide repeat-containing protein At2g13600... | 0.03 | OrthoFinder output from all 47 species | |
| Msp_g03174 | No alias | not classified & original description: none | 0.04 | OrthoFinder output from all 47 species | |
| Msp_g04488 | No alias | not classified & original description: none | 0.04 | OrthoFinder output from all 47 species | |
| Msp_g15230 | CRR22 | not classified & original description: none | 0.05 | OrthoFinder output from all 47 species | |
| Msp_g34536 | No alias | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Nbi_g04844 | No alias | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Ore_g36349 | PTAC9, OSB2 | ssDNA-binding protein *(OSB) & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Pir_g02495 | No alias | not classified & original description: none | 0.05 | OrthoFinder output from all 47 species | |
| Pir_g10914 | No alias | not classified & original description: none | 0.04 | OrthoFinder output from all 47 species | |
| Pir_g12992 | No alias | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Pir_g13583 | VAC1, ECB2, ATECB2 | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Pir_g14481 | No alias | not classified & original description: none | 0.05 | OrthoFinder output from all 47 species | |
| Pir_g59977 | CRR2 | not classified & original description: none | 0.06 | OrthoFinder output from all 47 species | |
| Pir_g63292 | No alias | not classified & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| Pir_g63843 | No alias | not classified & original description: none | 0.05 | OrthoFinder output from all 47 species | |
| Pnu_g19854 | No alias | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Pnu_g30997 | OTP84 | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Ppi_g03245 | OTP84 | not classified & original description: none | 0.04 | OrthoFinder output from all 47 species | |
| Ppi_g18809 | No alias | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Ppi_g53029 | OTP86 | not classified & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| Sacu_v1.1_s0059.g015139 | No alias | not classified & original description: CDS=1-852 | 0.03 | OrthoFinder output from all 47 species | |
| Sacu_v1.1_s0080.g017968 | No alias | not classified & original description: CDS=1-2673 | 0.05 | OrthoFinder output from all 47 species | |
| Sam_g18597 | No alias | not classified & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| Spa_g07598 | OTP84 | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Spa_g15123 | No alias | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Spa_g20286 | No alias | not classified & original description: none | 0.04 | OrthoFinder output from all 47 species | |
| Spa_g24048 | CRR2 | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Spa_g26279 | No alias | ssDNA-binding protein *(OSB) & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Spa_g51293 | No alias | not classified & original description: none | 0.04 | OrthoFinder output from all 47 species | |
| Spa_g56457 | OTP84 | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Tin_g05031 | No alias | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Tin_g27046 | No alias | not classified & original description: none | 0.04 | OrthoFinder output from all 47 species | |
| Zm00001e011748_P001 | LPA66, Zm00001e011748 | Pentatricopeptide repeat-containing protein At4g21065... | 0.02 | OrthoFinder output from all 47 species | |
| Zm00001e023289_P001 | Zm00001e023289 | Pentatricopeptide repeat-containing protein At1g31920... | 0.02 | OrthoFinder output from all 47 species | |
| Zm00001e032581_P001 | Zm00001e032581 | RNA editing factor (BLX) | 0.02 | OrthoFinder output from all 47 species |
| Type | GO Term | Name | Evidence | Source |
|---|---|---|---|---|
No GO annotation available for this sequence |
| Type | GO Term | Name | Evidence | Source |
|---|---|---|---|---|
| BP | GO:0000079 | regulation of cyclin-dependent protein serine/threonine kinase activity | IEP | HCCA |
| BP | GO:0001932 | regulation of protein phosphorylation | IEP | HCCA |
| BP | GO:0019220 | regulation of phosphate metabolic process | IEP | HCCA |
| BP | GO:0019222 | regulation of metabolic process | IEP | HCCA |
| MF | GO:0019899 | enzyme binding | IEP | HCCA |
| MF | GO:0019900 | kinase binding | IEP | HCCA |
| MF | GO:0019901 | protein kinase binding | IEP | HCCA |
| BP | GO:0031323 | regulation of cellular metabolic process | IEP | HCCA |
| BP | GO:0031399 | regulation of protein modification process | IEP | HCCA |
| BP | GO:0042325 | regulation of phosphorylation | IEP | HCCA |
| BP | GO:0043549 | regulation of kinase activity | IEP | HCCA |
| BP | GO:0045859 | regulation of protein kinase activity | IEP | HCCA |
| BP | GO:0050790 | regulation of catalytic activity | IEP | HCCA |
| BP | GO:0051171 | regulation of nitrogen compound metabolic process | IEP | HCCA |
| BP | GO:0051174 | regulation of phosphorus metabolic process | IEP | HCCA |
| BP | GO:0051246 | regulation of protein metabolic process | IEP | HCCA |
| BP | GO:0051338 | regulation of transferase activity | IEP | HCCA |
| BP | GO:0051726 | regulation of cell cycle | IEP | HCCA |
| BP | GO:0060255 | regulation of macromolecule metabolic process | IEP | HCCA |
| BP | GO:0065009 | regulation of molecular function | IEP | HCCA |
| BP | GO:0071900 | regulation of protein serine/threonine kinase activity | IEP | HCCA |
| BP | GO:0080090 | regulation of primary metabolic process | IEP | HCCA |
| BP | GO:1904029 | regulation of cyclin-dependent protein kinase activity | IEP | HCCA |
| InterPro domains | Description | Start | Stop |
|---|---|---|---|
| IPR002885 | Pentatricopeptide_repeat | 603 | 626 |
| IPR002885 | Pentatricopeptide_repeat | 502 | 526 |
| IPR002885 | Pentatricopeptide_repeat | 200 | 224 |
| IPR002885 | Pentatricopeptide_repeat | 401 | 422 |
| IPR046848 | E_motif | 646 | 690 |
| IPR002885 | Pentatricopeptide_repeat | 427 | 475 |
| IPR002885 | Pentatricopeptide_repeat | 225 | 271 |
| IPR002885 | Pentatricopeptide_repeat | 527 | 574 |
| IPR002885 | Pentatricopeptide_repeat | 325 | 373 |
| IPR002885 | Pentatricopeptide_repeat | 123 | 171 |
| No external refs found! |