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  5. Cba_g04874

Cba_g04874 (RPS18A, PFL, PFL1)


Aliases : RPS18A, PFL, PFL1

Description : component *(uS13) of small ribosomal-subunit (SSU) proteome & original description: none


Gene families : OG0001648 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0001648_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Cba_g04874

Target Alias Description ECC score Gene Family Method Actions
AT1G34030 No alias Ribosomal protein S13/S18 family 0.02 OrthoFinder output from all 47 species
Azfi_s0094.g043510 RPS18A, PFL, PFL1 not classified & original description: CDS=1-351 0.02 OrthoFinder output from all 47 species
Cre06.g272950 RPS18A, PFL, PFL1 Protein biosynthesis.cytosolic ribosome.small subunit... 0.02 OrthoFinder output from all 47 species
LOC_Os03g58050.1 RPS18A, PFL,... component RPS18 of SSU proteome 0.02 OrthoFinder output from all 47 species
MA_10429265g0010 RPS18A, PFL, PFL1 component RPS18 of SSU proteome 0.03 OrthoFinder output from all 47 species
MA_10431843g0010 RPS18A, PFL, PFL1 component RPS18 of SSU proteome 0.04 OrthoFinder output from all 47 species
Pp3c6_21770V3.1 RPS18A, PFL,... Ribosomal protein S13/S18 family 0.01 OrthoFinder output from all 47 species
Smo267619 RPS18A, PFL, PFL1 Protein biosynthesis.cytosolic ribosome.small subunit... 0.02 OrthoFinder output from all 47 species
Spa_g40316 RPS18A, PFL, PFL1 component *(uS13) of small ribosomal-subunit (SSU)... 0.02 OrthoFinder output from all 47 species
Zm00001e005967_P001 RPS18A, PFL,... component RPS18 of SSU proteome 0.04 OrthoFinder output from all 47 species
Zm00001e011880_P001 RPS18A, PFL,... component RPS18 of SSU proteome 0.04 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0003723 RNA binding IEA Interproscan
MF GO:0003735 structural constituent of ribosome IEA Interproscan
CC GO:0005840 ribosome IEA Interproscan
BP GO:0006412 translation IEA Interproscan
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Type GO Term Name Evidence Source
MF GO:0003924 GTPase activity IEP HCCA
InterPro domains Description Start Stop
IPR001892 Ribosomal_S13 14 142
No external refs found!