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  5. Cba_g04799

Cba_g04799 (AtAGP20, AGP20)


Aliases : AtAGP20, AGP20

Description : not classified & original description: none


Gene families : OG0003275 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0003275_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Cba_g04799
Cluster HCCA: Cluster_34

Target Alias Description ECC score Gene Family Method Actions
Ceric.16G056000.1 AtAGP20, AGP20,... not classified & original description: pacid=50590279... 0.03 OrthoFinder output from all 47 species
LOC_Os01g46850.1 LOC_Os01g46850 no hits & (original description: none) 0.03 OrthoFinder output from all 47 species
Len_g59793 AtAGP20, AGP20 not classified & original description: none 0.04 OrthoFinder output from all 47 species
Mp8g16120.1 No alias no hits & (original description: none) 0.02 OrthoFinder output from all 47 species
Spa_g41462 AtAGP20, AGP20 not classified & original description: none 0.04 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0003905 alkylbase DNA N-glycosylase activity IEP HCCA
MF GO:0004175 endopeptidase activity IEP HCCA
MF GO:0004190 aspartic-type endopeptidase activity IEP HCCA
BP GO:0006259 DNA metabolic process IEP HCCA
BP GO:0006281 DNA repair IEP HCCA
BP GO:0006284 base-excision repair IEP HCCA
BP GO:0006950 response to stress IEP HCCA
BP GO:0006974 cellular response to DNA damage stimulus IEP HCCA
MF GO:0008233 peptidase activity IEP HCCA
MF GO:0008725 DNA-3-methyladenine glycosylase activity IEP HCCA
MF GO:0016787 hydrolase activity IEP HCCA
MF GO:0016798 hydrolase activity, acting on glycosyl bonds IEP HCCA
MF GO:0016799 hydrolase activity, hydrolyzing N-glycosyl compounds IEP HCCA
MF GO:0019104 DNA N-glycosylase activity IEP HCCA
BP GO:0033554 cellular response to stress IEP HCCA
MF GO:0043733 DNA-3-methylbase glycosylase activity IEP HCCA
BP GO:0050896 response to stimulus IEP HCCA
BP GO:0051716 cellular response to stimulus IEP HCCA
MF GO:0070001 aspartic-type peptidase activity IEP HCCA
MF GO:0140097 catalytic activity, acting on DNA IEP HCCA
MF GO:0140640 catalytic activity, acting on a nucleic acid IEP HCCA
InterPro domains Description Start Stop
IPR009424 AGP16/20/22/41 79 111
No external refs found!