- Species
- Tools
- Expression Profiles
- Compare profiles
- Create heatmap
- Export expression levels
- Expression Specificity
- Compare specificities
- Find specific profiles
- Co-expression Networks
- Create custom network
- Find enriched clusters
- Search
Aliases : CRR22
Description : not classified & original description: none
Gene families : OG0000000 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): No tree available for this family
Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.
| Target | Alias | Description | ECC score | Gene Family Method | Actions |
|---|---|---|---|---|---|
| AT5G48910 | LPA66 | Pentatricopeptide repeat (PPR) superfamily protein | 0.04 | OrthoFinder output from all 47 species | |
| Aev_g27648 | CRR22 | not classified & original description: none | 0.04 | OrthoFinder output from all 47 species | |
| Ala_g24034 | No alias | not classified & original description: none | 0.05 | OrthoFinder output from all 47 species | |
| Als_g18239 | No alias | not classified & original description: none | 0.04 | OrthoFinder output from all 47 species | |
| Als_g18988 | No alias | not classified & original description: none | 0.06 | OrthoFinder output from all 47 species | |
| Als_g32399 | No alias | not classified & original description: none | 0.04 | OrthoFinder output from all 47 species | |
| Als_g33541 | No alias | not classified & original description: none | 0.05 | OrthoFinder output from all 47 species | |
| Aob_g05250 | No alias | not classified & original description: none | 0.05 | OrthoFinder output from all 47 species | |
| Aop_g04212 | No alias | not classified & original description: none | 0.04 | OrthoFinder output from all 47 species | |
| Aop_g04342 | No alias | not classified & original description: none | 0.06 | OrthoFinder output from all 47 species | |
| Aop_g09260 | EMB2758 | not classified & original description: none | 0.04 | OrthoFinder output from all 47 species | |
| Aop_g16505 | No alias | not classified & original description: none | 0.05 | OrthoFinder output from all 47 species | |
| Aop_g28688 | No alias | not classified & original description: none | 0.05 | OrthoFinder output from all 47 species | |
| Aop_g36381 | OSB1 | ssDNA-binding protein *(OSB) & original description: none | 0.05 | OrthoFinder output from all 47 species | |
| Aop_g68694 | OTP84 | not classified & original description: none | 0.04 | OrthoFinder output from all 47 species | |
| Aspi01Gene30532.t1 | Aspi01Gene30532 | not classified & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| Cba_g19566 | No alias | not classified & original description: none | 0.08 | OrthoFinder output from all 47 species | |
| Cba_g45997 | CRR2 | not classified & original description: none | 0.04 | OrthoFinder output from all 47 species | |
| Cba_g67304 | No alias | not classified & original description: none | 0.06 | OrthoFinder output from all 47 species | |
| Ceric.01G124700.1 | Ceric.01G124700 | not classified & original description: pacid=50591887... | 0.05 | OrthoFinder output from all 47 species | |
| Ceric.07G067300.1 | Ceric.07G067300 | not classified & original description: pacid=50625994... | 0.05 | OrthoFinder output from all 47 species | |
| Ceric.09G027000.1 | Ceric.09G027000 | not classified & original description: pacid=50586634... | 0.05 | OrthoFinder output from all 47 species | |
| Ceric.1Z242100.1 | CRR22, Ceric.1Z242100 | not classified & original description: pacid=50573437... | 0.05 | OrthoFinder output from all 47 species | |
| Ceric.22G020200.1 | Ceric.22G020200 | not classified & original description: pacid=50615278... | 0.03 | OrthoFinder output from all 47 species | |
| Ceric.23G076700.1 | OTP84, Ceric.23G076700 | not classified & original description: pacid=50610256... | 0.06 | OrthoFinder output from all 47 species | |
| Ceric.26G013000.1 | Ceric.26G013000 | not classified & original description: pacid=50600010... | 0.05 | OrthoFinder output from all 47 species | |
| Ceric.39G023200.1 | CRR2, Ceric.39G023200 | not classified & original description: pacid=50582462... | 0.04 | OrthoFinder output from all 47 species | |
| Dcu_g06828 | No alias | not classified & original description: none | 0.07 | OrthoFinder output from all 47 species | |
| Dcu_g07807 | No alias | not classified & original description: none | 0.05 | OrthoFinder output from all 47 species | |
| Dcu_g12787 | No alias | not classified & original description: none | 0.07 | OrthoFinder output from all 47 species | |
| Dcu_g17915 | No alias | not classified & original description: none | 0.07 | OrthoFinder output from all 47 species | |
| Dcu_g18549 | No alias | ssDNA-binding protein *(OSB) & original description: none | 0.05 | OrthoFinder output from all 47 species | |
| Dcu_g30253 | No alias | ssDNA-binding protein *(OSB) & original description: none | 0.06 | OrthoFinder output from all 47 species | |
| Dcu_g40120 | No alias | not classified & original description: none | 0.05 | OrthoFinder output from all 47 species | |
| Dcu_g43238 | CRR22 | not classified & original description: none | 0.06 | OrthoFinder output from all 47 species | |
| Dcu_g47804 | MEF21 | not classified & original description: none | 0.06 | OrthoFinder output from all 47 species | |
| Dcu_g48025 | MEF21 | not classified & original description: none | 0.05 | OrthoFinder output from all 47 species | |
| Dcu_g50014 | No alias | ssDNA-binding protein *(OSB) & original description: none | 0.06 | OrthoFinder output from all 47 species | |
| Dde_g05938 | OTP86 | not classified & original description: none | 0.04 | OrthoFinder output from all 47 species | |
| Dde_g15506 | No alias | not classified & original description: none | 0.05 | OrthoFinder output from all 47 species | |
| Ehy_g09988 | No alias | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| LOC_Os03g52475.1 | LOC_Os03g52475 | Pentatricopeptide repeat-containing protein At3g28660... | 0.03 | OrthoFinder output from all 47 species | |
| Len_g13067 | No alias | not classified & original description: none | 0.07 | OrthoFinder output from all 47 species | |
| Msp_g33833 | No alias | not classified & original description: none | 0.06 | OrthoFinder output from all 47 species | |
| Msp_g33982 | EMB2758 | not classified & original description: none | 0.05 | OrthoFinder output from all 47 species | |
| Msp_g34019 | No alias | ssDNA-binding protein *(OSB) & original description: none | 0.06 | OrthoFinder output from all 47 species | |
| Nbi_g16471 | No alias | not classified & original description: none | 0.06 | OrthoFinder output from all 47 species | |
| Ore_g26310 | No alias | not classified & original description: none | 0.04 | OrthoFinder output from all 47 species | |
| Pir_g02854 | No alias | not classified & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| Pnu_g03353 | No alias | not classified & original description: none | 0.05 | OrthoFinder output from all 47 species | |
| Ppi_g53025 | No alias | not classified & original description: none | 0.04 | OrthoFinder output from all 47 species | |
| Ppi_g57742 | No alias | not classified & original description: none | 0.05 | OrthoFinder output from all 47 species | |
| Ppi_g59214 | No alias | not classified & original description: none | 0.05 | OrthoFinder output from all 47 species | |
| Sam_g14049 | No alias | not classified & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| Sam_g30281 | No alias | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Solyc01g081110.4.1 | SLO1, Solyc01g081110 | Pentatricopeptide repeat-containing protein At1g08070,... | 0.03 | OrthoFinder output from all 47 species | |
| Solyc01g095160.3.1 | Solyc01g095160 | Pentatricopeptide repeat-containing protein At4g37170... | 0.03 | OrthoFinder output from all 47 species | |
| Solyc01g097670.4.1 | EMB2261, Solyc01g097670 | RNA editing factor (ECD1) | 0.03 | OrthoFinder output from all 47 species | |
| Solyc02g094480.4.1 | Solyc02g094480 | RNA editing factor (MEF14) | 0.03 | OrthoFinder output from all 47 species | |
| Solyc03g006990.1.1 | Solyc03g006990 | Pentatricopeptide repeat-containing protein At5g66520... | 0.06 | OrthoFinder output from all 47 species | |
| Solyc05g023900.1.1 | Solyc05g023900 | Putative pentatricopeptide repeat-containing protein... | 0.03 | OrthoFinder output from all 47 species | |
| Solyc06g048900.1.1 | Solyc06g048900 | Pentatricopeptide repeat-containing protein At2g40720... | 0.03 | OrthoFinder output from all 47 species | |
| Solyc07g005850.3.1 | Solyc07g005850 | Pentatricopeptide repeat-containing protein At4g30700... | 0.03 | OrthoFinder output from all 47 species | |
| Solyc12g096510.3.1 | Solyc12g096510 | Pentatricopeptide repeat-containing protein At5g66520... | 0.06 | OrthoFinder output from all 47 species | |
| Spa_g02192 | No alias | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Spa_g05942 | No alias | not classified & original description: none | 0.05 | OrthoFinder output from all 47 species | |
| Spa_g07089 | No alias | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Spa_g14323 | CRR22 | not classified & original description: none | 0.04 | OrthoFinder output from all 47 species | |
| Spa_g15050 | No alias | not classified & original description: none | 0.04 | OrthoFinder output from all 47 species | |
| Spa_g17519 | No alias | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Spa_g26699 | No alias | not classified & original description: none | 0.04 | OrthoFinder output from all 47 species | |
| Spa_g33240 | No alias | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Spa_g50540 | No alias | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Spa_g52133 | No alias | ssDNA-binding protein *(OSB) & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Spa_g55591 | CRR2 | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Tin_g16989 | EMB2758 | not classified & original description: none | 0.05 | OrthoFinder output from all 47 species | |
| Tin_g17148 | VAC1, ECB2, ATECB2 | not classified & original description: none | 0.07 | OrthoFinder output from all 47 species | |
| Tin_g30441 | No alias | not classified & original description: none | 0.05 | OrthoFinder output from all 47 species |
| Type | GO Term | Name | Evidence | Source |
|---|---|---|---|---|
No GO annotation available for this sequence |
| Type | GO Term | Name | Evidence | Source |
|---|---|---|---|---|
No Predicted GO terms available for this sequence |
| InterPro domains | Description | Start | Stop |
|---|---|---|---|
| IPR002885 | Pentatricopeptide_repeat | 273 | 321 |
| IPR002885 | Pentatricopeptide_repeat | 374 | 422 |
| IPR002885 | Pentatricopeptide_repeat | 576 | 624 |
| IPR002885 | Pentatricopeptide_repeat | 476 | 524 |
| IPR002885 | Pentatricopeptide_repeat | 138 | 186 |
| IPR002885 | Pentatricopeptide_repeat | 450 | 474 |
| IPR002885 | Pentatricopeptide_repeat | 248 | 269 |
| IPR002885 | Pentatricopeptide_repeat | 82 | 103 |
| IPR002885 | Pentatricopeptide_repeat | 655 | 674 |
| No external refs found! |