Aliases : SOC1, AGL20, ATSOC1
Description : MADS/AGL-type transcription factor & original description: none
Gene families : OG0000022 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): No tree available for this family
Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.
Target | Alias | Description | ECC score | Gene Family Method | Actions |
---|---|---|---|---|---|
AMTR_s00010p00214260 | AGL66,... | RNA biosynthesis.transcriptional activation.MADS box... | 0.02 | OrthoFinder output from all 47 species | |
AMTR_s00109p00015260 | evm_27.TU.AmTr_v1... | RNA biosynthesis.transcriptional activation.MADS box... | 0.02 | OrthoFinder output from all 47 species | |
AT1G77950 | AGL67 | AGAMOUS-like 67 | 0.02 | OrthoFinder output from all 47 species | |
AT2G03710 | AGL3, SEP4 | K-box region and MADS-box transcription factor family protein | 0.03 | OrthoFinder output from all 47 species | |
AT2G45660 | SOC1, AGL20, ATSOC1 | AGAMOUS-like 20 | 0.03 | OrthoFinder output from all 47 species | |
Als_g18421 | AGL42 | MADS/AGL-type transcription factor & original description: none | 0.03 | OrthoFinder output from all 47 species | |
Aspi01Gene19457.t1 | AGL16, Aspi01Gene19457 | MADS/AGL-type transcription factor & original description: none | 0.03 | OrthoFinder output from all 47 species | |
Aspi01Gene44552.t1 | AGL13, Aspi01Gene44552 | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
Azfi_s0038.g026346 | SHP2, AGL5 | MADS/AGL-type transcription factor & original... | 0.05 | OrthoFinder output from all 47 species | |
Dcu_g04433 | SOC1, AGL20, ATSOC1 | MADS/AGL-type transcription factor & original description: none | 0.04 | OrthoFinder output from all 47 species | |
Ehy_g32401 | AGL10, CAL1, CAL | not classified & original description: none | 0.02 | OrthoFinder output from all 47 species | |
GSVIVT01000175001 | No alias | RNA biosynthesis.transcriptional activation.MADS box... | 0.03 | OrthoFinder output from all 47 species | |
GSVIVT01008560001 | SOC1, AGL20, ATSOC1 | RNA biosynthesis.transcriptional activation.MADS box... | 0.03 | OrthoFinder output from all 47 species | |
Gb_38922 | AGL6 | transcription factor (MADS/AGL) | 0.04 | OrthoFinder output from all 47 species | |
LOC_Os03g54160.1 | AGL7, AP1, LOC_Os03g54160 | transcription factor (MADS/AGL) | 0.03 | OrthoFinder output from all 47 species | |
LOC_Os06g11330.1 | SVP, AGL22,... | transcription factor (MADS/AGL) | 0.03 | OrthoFinder output from all 47 species | |
LOC_Os06g23980.1 | AGL16, LOC_Os06g23980 | MADS-box transcription factor 27 OS=Oryza sativa subsp.... | 0.04 | OrthoFinder output from all 47 species | |
LOC_Os09g02780.1 | AGL61, DIA,... | transcription factor (MADS/AGL) | 0.02 | OrthoFinder output from all 47 species | |
LOC_Os11g43740.1 | AGL65, LOC_Os11g43740 | transcription factor (MADS/AGL) | 0.02 | OrthoFinder output from all 47 species | |
Len_g10506 | AGL6 | MADS/AGL-type transcription factor & original description: none | 0.03 | OrthoFinder output from all 47 species | |
Len_g28209 | STK, AGL11 | MADS/AGL-type transcription factor & original description: none | 0.03 | OrthoFinder output from all 47 species | |
Lfl_g13167 | AGL42 | MADS/AGL-type transcription factor & original description: none | 0.03 | OrthoFinder output from all 47 species | |
Lfl_g26035 | AGL7, AP1 | MADS/AGL-type transcription factor & original description: none | 0.03 | OrthoFinder output from all 47 species | |
MA_10332736g0010 | STK, AGL11 | transcription factor (MADS/AGL) | 0.04 | OrthoFinder output from all 47 species | |
MA_1170g0010 | AGL8, FUL | no hits & (original description: none) | 0.03 | OrthoFinder output from all 47 species | |
Ppi_g56067 | No alias | not classified & original description: none | 0.04 | OrthoFinder output from all 47 species | |
Sam_g48748 | No alias | MADS/AGL-type transcription factor & original description: none | 0.02 | OrthoFinder output from all 47 species | |
Sam_g48749 | No alias | MADS/AGL-type transcription factor & original description: none | 0.02 | OrthoFinder output from all 47 species | |
Solyc01g106710.1.1 | AGL62, Solyc01g106710 | component MED19 of head module of MEDIATOR transcription... | 0.03 | OrthoFinder output from all 47 species | |
Solyc03g114840.3.1 | AGL2, SEP1,... | transcription factor (MADS/AGL) | 0.03 | OrthoFinder output from all 47 species | |
Zm00001e000846_P003 | AGL4, SEP2,... | transcription factor (MADS/AGL) | 0.03 | OrthoFinder output from all 47 species | |
Zm00001e003667_P001 | AGL9, SEP3,... | transcription factor (MADS/AGL) | 0.02 | OrthoFinder output from all 47 species | |
Zm00001e006950_P001 | AGL32, TT16,... | transcription factor (MADS/AGL) | 0.03 | OrthoFinder output from all 47 species | |
Zm00001e010125_P001 | AGL9, SEP3,... | transcription factor (MADS/AGL) | 0.03 | OrthoFinder output from all 47 species | |
Zm00001e014926_P001 | AGL16, Zm00001e014926 | transcription factor (MADS/AGL) | 0.02 | OrthoFinder output from all 47 species | |
Zm00001e015447_P001 | AGL6, Zm00001e015447 | transcription factor (MADS/AGL) | 0.03 | OrthoFinder output from all 47 species | |
Zm00001e030373_P001 | AGL10, CAL1,... | transcription factor (MADS/AGL) | 0.02 | OrthoFinder output from all 47 species | |
Zm00001e031267_P003 | SHP2, AGL5,... | transcription factor (MADS/AGL) | 0.03 | OrthoFinder output from all 47 species | |
Zm00001e033144_P001 | AGL29, Zm00001e033144 | transcription factor (MADS/AGL) | 0.03 | OrthoFinder output from all 47 species | |
Zm00001e034629_P001 | AGL9, SEP3,... | transcription factor (MADS/AGL) | 0.03 | OrthoFinder output from all 47 species | |
Zm00001e036159_P001 | AGL24, Zm00001e036159 | transcription factor (MADS/AGL) | 0.04 | OrthoFinder output from all 47 species | |
Zm00001e038096_P002 | SOC1, AGL20,... | transcription factor (MADS/AGL) | 0.03 | OrthoFinder output from all 47 species | |
Zm00001e038716_P004 | AGL9, SEP3,... | transcription factor (MADS/AGL) | 0.03 | OrthoFinder output from all 47 species | |
Zm00001e039610_P001 | AGL8, FUL, Zm00001e039610 | transcription factor (MADS/AGL) | 0.03 | OrthoFinder output from all 47 species | |
Zm00001e039774_P001 | SHP2, AGL5,... | transcription factor (MADS/AGL) | 0.04 | OrthoFinder output from all 47 species |
Type | GO Term | Name | Evidence | Source |
---|---|---|---|---|
MF | GO:0003700 | DNA-binding transcription factor activity | IEA | Interproscan |
CC | GO:0005634 | nucleus | IEA | Interproscan |
BP | GO:0006355 | regulation of DNA-templated transcription | IEA | Interproscan |
Type | GO Term | Name | Evidence | Source |
---|---|---|---|---|
MF | GO:0004601 | peroxidase activity | IEP | HCCA |
BP | GO:0006351 | DNA-templated transcription | IEP | HCCA |
BP | GO:0006979 | response to oxidative stress | IEP | HCCA |
MF | GO:0016209 | antioxidant activity | IEP | HCCA |
MF | GO:0016684 | oxidoreductase activity, acting on peroxide as acceptor | IEP | HCCA |
BP | GO:0032774 | RNA biosynthetic process | IEP | HCCA |
BP | GO:0034654 | nucleobase-containing compound biosynthetic process | IEP | HCCA |
BP | GO:0097659 | nucleic acid-templated transcription | IEP | HCCA |
No external refs found! |