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  5. Cba_g04063

Cba_g04063


Description : regulatory protein *(MAS2) of rDNA transcription & original description: none


Gene families : OG0004955 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0004955_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Cba_g04063

Target Alias Description ECC score Gene Family Method Actions
Ceric.24G045500.1 Ceric.24G045500 regulatory protein *(MAS2) of rDNA transcription &... 0.03 OrthoFinder output from all 47 species
Dcu_g01465 No alias regulatory protein *(MAS2) of rDNA transcription &... 0.04 OrthoFinder output from all 47 species
GSVIVT01001165001 No alias No description available 0.02 OrthoFinder output from all 47 species
MA_10427624g0010 No alias rDNA transcriptional regulator (MAS2) 0.02 OrthoFinder output from all 47 species
Solyc11g071660.1.1 Solyc11g071660 rDNA transcriptional regulator (MAS2) 0.03 OrthoFinder output from all 47 species
Spa_g51545 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0003682 chromatin binding IEA Interproscan
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Type GO Term Name Evidence Source
MF GO:0003676 nucleic acid binding IEP HCCA
MF GO:0003677 DNA binding IEP HCCA
MF GO:0003723 RNA binding IEP HCCA
MF GO:0004057 arginyltransferase activity IEP HCCA
MF GO:0004842 ubiquitin-protein transferase activity IEP HCCA
MF GO:0005515 protein binding IEP HCCA
BP GO:0016598 protein arginylation IEP HCCA
MF GO:0016740 transferase activity IEP HCCA
MF GO:0016755 aminoacyltransferase activity IEP HCCA
MF GO:0019787 ubiquitin-like protein transferase activity IEP HCCA
BP GO:0019915 lipid storage IEP HCCA
MF GO:0043531 ADP binding IEP HCCA
BP GO:0051235 maintenance of location IEP HCCA
MF GO:0061630 ubiquitin protein ligase activity IEP HCCA
MF GO:0061659 ubiquitin-like protein ligase activity IEP HCCA
MF GO:0097159 organic cyclic compound binding IEP HCCA
MF GO:0140096 catalytic activity, acting on a protein IEP HCCA
MF GO:1901363 heterocyclic compound binding IEP HCCA
InterPro domains Description Start Stop
IPR009269 NKAP_C 670 768
No external refs found!