Cba_g03761


Description : translation initiation factor *(IF-3) & original description: none


Gene families : OG0001945 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0001945_tree

Sequence : coding (download), protein (download)


Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Cba_g03761
Cluster HCCA: Cluster_288

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00137p00042790 evm_27.TU.AmTr_v1... Protein biosynthesis.organelle translation... 0.07 OrthoFinder output from all 47 species
AT2G24060 No alias Translation initiation factor 3 protein 0.04 OrthoFinder output from all 47 species
Adi_g025876 No alias translation initiation factor *(IF-3) & original... 0.06 OrthoFinder output from all 47 species
Adi_g102476 No alias translation initiation factor *(IF-3) & original... 0.05 OrthoFinder output from all 47 species
Ala_g01530 No alias translation initiation factor *(IF-3) & original... 0.07 OrthoFinder output from all 47 species
Als_g00759 No alias translation initiation factor *(IF-3) & original... 0.07 OrthoFinder output from all 47 species
Aob_g39107 No alias translation initiation factor *(IF-3) & original... 0.04 OrthoFinder output from all 47 species
Aop_g14624 No alias translation initiation factor *(IF-3) & original... 0.06 OrthoFinder output from all 47 species
Aspi01Gene35728.t1 Aspi01Gene35728 translation initiation factor *(IF-3) & original... 0.03 OrthoFinder output from all 47 species
Azfi_s0095.g043623 No alias translation initiation factor *(IF-3) & original... 0.04 OrthoFinder output from all 47 species
Ceric.07G007000.1 Ceric.07G007000 translation initiation factor *(IF-3) & original... 0.03 OrthoFinder output from all 47 species
Cpa|evm.model.tig00001278.1 No alias Protein biosynthesis.organelle translation... 0.01 OrthoFinder output from all 47 species
Cre01.g001550 No alias Protein biosynthesis.organelle translation... 0.01 OrthoFinder output from all 47 species
Dcu_g02518 No alias translation initiation factor *(IF-3) & original... 0.05 OrthoFinder output from all 47 species
Dde_g10882 No alias translation initiation factor *(IF-3) & original... 0.05 OrthoFinder output from all 47 species
Ehy_g07464 No alias translation initiation factor *(IF-3) & original... 0.04 OrthoFinder output from all 47 species
GSVIVT01023642001 No alias Protein biosynthesis.organelle translation... 0.03 OrthoFinder output from all 47 species
LOC_Os02g55120.1 LOC_Os02g55120 IF-3 translation initiation factor 0.04 OrthoFinder output from all 47 species
Len_g15141 No alias translation initiation factor *(IF-3) & original... 0.05 OrthoFinder output from all 47 species
Lfl_g37528 No alias translation initiation factor *(IF-3) & original... 0.09 OrthoFinder output from all 47 species
MA_18402g0010 No alias Translation initiation factor IF3-2, chloroplastic... 0.04 OrthoFinder output from all 47 species
Msp_g11764 No alias translation initiation factor *(IF-3) & original... 0.03 OrthoFinder output from all 47 species
Nbi_g00833 No alias translation initiation factor *(IF-3) & original... 0.03 OrthoFinder output from all 47 species
Ore_g07395 No alias translation initiation factor *(IF-3) & original... 0.02 OrthoFinder output from all 47 species
Pnu_g10213 No alias translation initiation factor *(IF-3) & original... 0.05 OrthoFinder output from all 47 species
Pp3c14_5800V3.1 Pp3c14_5800 Translation initiation factor 3 protein 0.01 OrthoFinder output from all 47 species
Ppi_g00723 No alias translation initiation factor *(IF-3) & original... 0.09 OrthoFinder output from all 47 species
Sacu_v1.1_s0113.g020863 No alias translation initiation factor *(IF-3) & original... 0.03 OrthoFinder output from all 47 species
Smo439129 No alias Protein biosynthesis.organelle translation... 0.03 OrthoFinder output from all 47 species
Spa_g00393 No alias translation initiation factor *(IF-3) & original... 0.03 OrthoFinder output from all 47 species
Tin_g29773 No alias translation initiation factor *(IF-3) & original... 0.02 OrthoFinder output from all 47 species
Zm00001e016109_P001 Zm00001e016109 IF-3 translation initiation factor 0.03 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
BP GO:0006413 translational initiation IEA Interproscan
Type GO Term Name Evidence Source
MF GO:0004418 hydroxymethylbilane synthase activity IEP HCCA
MF GO:0004601 peroxidase activity IEP HCCA
CC GO:0009521 photosystem IEP HCCA
CC GO:0009523 photosystem II IEP HCCA
CC GO:0009654 photosystem II oxygen evolving complex IEP HCCA
BP GO:0015979 photosynthesis IEP HCCA
MF GO:0016209 antioxidant activity IEP HCCA
MF GO:0016684 oxidoreductase activity, acting on peroxide as acceptor IEP HCCA
MF GO:0016765 transferase activity, transferring alkyl or aryl (other than methyl) groups IEP HCCA
CC GO:0019898 extrinsic component of membrane IEP HCCA
BP GO:0033013 tetrapyrrole metabolic process IEP HCCA
BP GO:0033014 tetrapyrrole biosynthetic process IEP HCCA
MF GO:0051920 peroxiredoxin activity IEP HCCA
CC GO:1990204 oxidoreductase complex IEP HCCA
InterPro domains Description Start Stop
IPR019814 Translation_initiation_fac_3_N 148 216
IPR019815 Translation_initiation_fac_3_C 226 310
No external refs found!