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  5. Cba_g03398

Cba_g03398


Description : multifunctional scaffold component *(ATG11) of ATG1-13 autophagosome assembly control complex & original description: none


Gene families : OG0003054 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0003054_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Cba_g03398

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00064p00167250 evm_27.TU.AmTr_v1... Vesicle trafficking.autophagosome formation.ATG1-13... 0.03 OrthoFinder output from all 47 species
Mp4g18080.1 No alias multifunctional scaffold component ATG11 of ATG1-13... 0.02 OrthoFinder output from all 47 species
Ore_g37629 No alias multifunctional scaffold component *(ATG11) of ATG1-13... 0.03 OrthoFinder output from all 47 species
Smo182539 No alias Vesicle trafficking.autophagosome formation.ATG1-13... 0.03 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
BP GO:0000724 double-strand break repair via homologous recombination IEP HCCA
BP GO:0000725 recombinational repair IEP HCCA
MF GO:0003676 nucleic acid binding IEP HCCA
MF GO:0003723 RNA binding IEP HCCA
MF GO:0005488 binding IEP HCCA
BP GO:0006259 DNA metabolic process IEP HCCA
BP GO:0006281 DNA repair IEP HCCA
BP GO:0006302 double-strand break repair IEP HCCA
BP GO:0006310 DNA recombination IEP HCCA
BP GO:0006950 response to stress IEP HCCA
BP GO:0006974 cellular response to DNA damage stimulus IEP HCCA
MF GO:0016763 pentosyltransferase activity IEP HCCA
BP GO:0033554 cellular response to stress IEP HCCA
BP GO:0051716 cellular response to stimulus IEP HCCA
MF GO:0097159 organic cyclic compound binding IEP HCCA
MF GO:1901363 heterocyclic compound binding IEP HCCA
InterPro domains Description Start Stop
IPR019460 Atg11_C 1001 1125
IPR045326 ATG17-like_dom 141 479
No external refs found!