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  5. Cba_g03364

Cba_g03364


Description : not classified & original description: none


Gene families : OG0000085 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000085_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Cba_g03364

Target Alias Description ECC score Gene Family Method Actions
AT5G01660 No alias CONTAINS InterPro DOMAIN/s: Galactose oxidase/kelch,... 0.03 OrthoFinder output from all 47 species
Adi_g060980 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Aev_g05521 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ala_g16636 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Als_g06277 No alias not classified & original description: none 0.06 OrthoFinder output from all 47 species
Als_g15133 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Als_g32079 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Als_g54590 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aob_g13927 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aop_g09280 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aop_g11335 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aspi01Gene14008.t1 Aspi01Gene14008 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aspi01Gene14009.t1 Aspi01Gene14009 not classified & original description: none 0.04 OrthoFinder output from all 47 species
Aspi01Gene27180.t1 Aspi01Gene27180 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aspi01Gene30813.t1 Aspi01Gene30813 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aspi01Gene30974.t1 Aspi01Gene30974 not classified & original description: none 0.05 OrthoFinder output from all 47 species
Aspi01Gene32971.t1 Aspi01Gene32971 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Azfi_s0780.g086675 No alias not classified & original description: CDS=1-675 0.04 OrthoFinder output from all 47 species
Ceric.1Z076400.1 Ceric.1Z076400 not classified & original description: pacid=50565862... 0.03 OrthoFinder output from all 47 species
Ceric.28G013700.1 Ceric.28G013700 not classified & original description: pacid=50569930... 0.03 OrthoFinder output from all 47 species
Dac_g16754 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Dcu_g03064 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Dcu_g05824 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Dcu_g42267 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ehy_g02510 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ehy_g12508 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Ehy_g16047 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ehy_g26125 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Len_g12998 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Mp6g13060.1 No alias B2 protein OS=Daucus carota (sp|p37707|b2_dauca : 261.0) 0.03 OrthoFinder output from all 47 species
Nbi_g02251 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Nbi_g06177 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Nbi_g07327 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ore_g09602 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Pnu_g11472 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Pnu_g13336 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Solyc06g050610.3.1 Solyc06g050610 B2 protein OS=Daucus carota (sp|p37707|b2_dauca : 102.0) 0.02 OrthoFinder output from all 47 species
Solyc10g076330.3.1 Solyc10g076330 B2 protein OS=Daucus carota (sp|p37707|b2_dauca : 118.0) 0.02 OrthoFinder output from all 47 species
Tin_g16977 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Zm00001e025841_P002 Zm00001e025841 B2 protein OS=Daucus carota (sp|p37707|b2_dauca : 116.0) 0.03 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0005515 protein binding IEA Interproscan
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Type GO Term Name Evidence Source
MF GO:0003676 nucleic acid binding IEP HCCA
MF GO:0008270 zinc ion binding IEP HCCA
MF GO:0016765 transferase activity, transferring alkyl or aryl (other than methyl) groups IEP HCCA
MF GO:0043167 ion binding IEP HCCA
InterPro domains Description Start Stop
IPR013989 Dev_and_cell_death_domain 39 166
IPR006652 Kelch_1 785 819
IPR006652 Kelch_1 647 677
IPR006652 Kelch_1 595 640
IPR006652 Kelch_1 690 734
IPR006652 Kelch_1 738 777
No external refs found!