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  5. Cba_g03326

Cba_g03326


Description : component *(ZCCHC8) of Nuclear Exosome Targeting (NEXT) activation complex & original description: none


Gene families : OG0004396 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0004396_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Cba_g03326

Target Alias Description ECC score Gene Family Method Actions
AT1G67210 No alias Proline-rich spliceosome-associated (PSP) family protein... 0.03 OrthoFinder output from all 47 species
Ala_g12628 No alias component *(ZCCHC8) of Nuclear Exosome Targeting (NEXT)... 0.03 OrthoFinder output from all 47 species
Als_g12559 No alias component *(ZCCHC8) of Nuclear Exosome Targeting (NEXT)... 0.02 OrthoFinder output from all 47 species
Ehy_g05083 No alias component *(ZCCHC8) of Nuclear Exosome Targeting (NEXT)... 0.04 OrthoFinder output from all 47 species
Ehy_g12214 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Ore_g23549 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Sacu_v1.1_s0068.g016378 No alias component *(ZCCHC8) of Nuclear Exosome Targeting (NEXT)... 0.04 OrthoFinder output from all 47 species
Sam_g35280 No alias component *(ZCCHC8) of Nuclear Exosome Targeting (NEXT)... 0.02 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0003676 nucleic acid binding IEP HCCA
MF GO:0003677 DNA binding IEP HCCA
MF GO:0003887 DNA-directed DNA polymerase activity IEP HCCA
MF GO:0005488 binding IEP HCCA
MF GO:0005515 protein binding IEP HCCA
BP GO:0006259 DNA metabolic process IEP HCCA
BP GO:0006260 DNA replication IEP HCCA
MF GO:0016779 nucleotidyltransferase activity IEP HCCA
MF GO:0034061 DNA polymerase activity IEP HCCA
MF GO:0140097 catalytic activity, acting on DNA IEP HCCA
MF GO:0140640 catalytic activity, acting on a nucleic acid IEP HCCA
InterPro domains Description Start Stop
IPR006568 PSP_pro-rich 446 485
No external refs found!