Cba_g03217


Description : not classified & original description: none


Gene families : OG0001331 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0001331_tree

Sequence : coding (download), protein (download)


Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Cba_g03217
Cluster HCCA: Cluster_288

Target Alias Description ECC score Gene Family Method Actions
AT2G40400 No alias Protein of unknown function (DUF399 and DUF3411) 0.05 OrthoFinder output from all 47 species
AT5G12470 No alias Protein of unknown function (DUF3411) 0.01 OrthoFinder output from all 47 species
Adi_g048192 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Aev_g02433 No alias not classified & original description: none 0.06 OrthoFinder output from all 47 species
Aev_g02541 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ala_g27723 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Als_g23936 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Als_g34117 No alias not classified & original description: none 0.1 OrthoFinder output from all 47 species
Aob_g01529 No alias not classified & original description: none 0.07 OrthoFinder output from all 47 species
Aspi01Gene06534.t1 Aspi01Gene06534 not classified & original description: none 0.04 OrthoFinder output from all 47 species
Azfi_s0055.g033944 No alias not classified & original description: CDS=18-2474 0.03 OrthoFinder output from all 47 species
Ceric.22G078500.1 Ceric.22G078500 not classified & original description: pacid=50614469... 0.04 OrthoFinder output from all 47 species
Cpa|evm.model.tig00021617.18 No alias No description available 0.03 OrthoFinder output from all 47 species
Dac_g18040 No alias not classified & original description: none 0.06 OrthoFinder output from all 47 species
Dac_g22117 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Dcu_g02819 No alias not classified & original description: none 0.12 OrthoFinder output from all 47 species
Dde_g06291 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ehy_g11697 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Ehy_g22985 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
GSVIVT01032197001 No alias Protein RETICULATA-RELATED 4, chloroplastic... 0.03 OrthoFinder output from all 47 species
LOC_Os01g61120.1 LOC_Os01g61120 Protein RETICULATA-RELATED 6, chloroplastic... 0.09 OrthoFinder output from all 47 species
Len_g11651 No alias not classified & original description: none 0.1 OrthoFinder output from all 47 species
MA_76219g0030 No alias Protein RETICULATA-RELATED 4, chloroplastic... 0.03 OrthoFinder output from all 47 species
Msp_g12361 No alias not classified & original description: none 0.06 OrthoFinder output from all 47 species
Nbi_g02954 No alias not classified & original description: none 0.09 OrthoFinder output from all 47 species
Nbi_g11767 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Ore_g20912 No alias not classified & original description: none 0.06 OrthoFinder output from all 47 species
Ore_g37256 No alias not classified & original description: none 0.06 OrthoFinder output from all 47 species
Pir_g20049 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Pir_g38821 No alias not classified & original description: none 0.12 OrthoFinder output from all 47 species
Pnu_g07921 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Pnu_g08153 No alias not classified & original description: none 0.06 OrthoFinder output from all 47 species
Ppi_g57518 No alias not classified & original description: none 0.06 OrthoFinder output from all 47 species
Sacu_v1.1_s0041.g012586 No alias not classified & original description: CDS=235-2685 0.02 OrthoFinder output from all 47 species
Sam_g08338 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Sam_g22685 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Sam_g35505 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Smo71514 No alias Protein RETICULATA-RELATED 4, chloroplastic... 0.04 OrthoFinder output from all 47 species
Solyc01g087750.4.1 Solyc01g087750 Protein RETICULATA-RELATED 4, chloroplastic... 0.1 OrthoFinder output from all 47 species
Spa_g07578 No alias not classified & original description: none 0.07 OrthoFinder output from all 47 species
Spa_g22578 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Tin_g13626 No alias not classified & original description: none 0.1 OrthoFinder output from all 47 species
Tin_g19385 No alias not classified & original description: none 0.08 OrthoFinder output from all 47 species
Zm00001e018574_P001 Zm00001e018574 Protein RETICULATA-RELATED 4, chloroplastic... 0.04 OrthoFinder output from all 47 species
Zm00001e019415_P003 Zm00001e019415 Protein RETICULATA-RELATED 6, chloroplastic... 0.04 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence

Type GO Term Name Evidence Source
MF GO:0000166 nucleotide binding IEP HCCA
MF GO:0003674 molecular_function IEP HCCA
MF GO:0003755 peptidyl-prolyl cis-trans isomerase activity IEP HCCA
MF GO:0003824 catalytic activity IEP HCCA
MF GO:0004175 endopeptidase activity IEP HCCA
MF GO:0004222 metalloendopeptidase activity IEP HCCA
MF GO:0004332 fructose-bisphosphate aldolase activity IEP HCCA
MF GO:0004518 nuclease activity IEP HCCA
BP GO:0006090 pyruvate metabolic process IEP HCCA
BP GO:0006091 generation of precursor metabolites and energy IEP HCCA
BP GO:0006096 glycolytic process IEP HCCA
BP GO:0006165 nucleoside diphosphate phosphorylation IEP HCCA
BP GO:0006757 ATP generation from ADP IEP HCCA
MF GO:0008237 metallopeptidase activity IEP HCCA
BP GO:0009132 nucleoside diphosphate metabolic process IEP HCCA
BP GO:0009135 purine nucleoside diphosphate metabolic process IEP HCCA
BP GO:0009179 purine ribonucleoside diphosphate metabolic process IEP HCCA
BP GO:0009185 ribonucleoside diphosphate metabolic process IEP HCCA
BP GO:0016052 carbohydrate catabolic process IEP HCCA
MF GO:0016462 pyrophosphatase activity IEP HCCA
MF GO:0016614 oxidoreductase activity, acting on CH-OH group of donors IEP HCCA
MF GO:0016616 oxidoreductase activity, acting on the CH-OH group of donors, NAD or NADP as acceptor IEP HCCA
MF GO:0016765 transferase activity, transferring alkyl or aryl (other than methyl) groups IEP HCCA
MF GO:0016787 hydrolase activity IEP HCCA
MF GO:0016817 hydrolase activity, acting on acid anhydrides IEP HCCA
MF GO:0016818 hydrolase activity, acting on acid anhydrides, in phosphorus-containing anhydrides IEP HCCA
MF GO:0016830 carbon-carbon lyase activity IEP HCCA
MF GO:0016832 aldehyde-lyase activity IEP HCCA
MF GO:0016853 isomerase activity IEP HCCA
MF GO:0016859 cis-trans isomerase activity IEP HCCA
MF GO:0017076 purine nucleotide binding IEP HCCA
MF GO:0017111 ribonucleoside triphosphate phosphatase activity IEP HCCA
BP GO:0032787 monocarboxylic acid metabolic process IEP HCCA
MF GO:0036094 small molecule binding IEP HCCA
BP GO:0046031 ADP metabolic process IEP HCCA
BP GO:0046939 nucleotide phosphorylation IEP HCCA
MF GO:0051287 NAD binding IEP HCCA
MF GO:0140096 catalytic activity, acting on a protein IEP HCCA
MF GO:1901265 nucleoside phosphate binding IEP HCCA
InterPro domains Description Start Stop
IPR021825 RETICULATA-related 191 368
No external refs found!