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  5. Cba_g03213

Cba_g03213 (RBP-DR1, AtRBP-DR1)


Aliases : RBP-DR1, AtRBP-DR1

Description : not classified & original description: none


Gene families : OG0001208 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0001208_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Cba_g03213

Target Alias Description ECC score Gene Family Method Actions
Ala_g13662 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Ala_g20626 FCA transcription factor *(FCA/SSF) & original description: none 0.04 OrthoFinder output from all 47 species
Dac_g12063 FCA transcription factor *(FCA/SSF) & original description: none 0.03 OrthoFinder output from all 47 species
Msp_g06543 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Nbi_g02118 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ore_g19709 FCA transcription factor *(FCA/SSF) & original description: none 0.02 OrthoFinder output from all 47 species
Ppi_g08240 FCA transcription factor *(FCA/SSF) & original description: none 0.03 OrthoFinder output from all 47 species
Solyc01g058450.3.1 FCA, Solyc01g058450 Flowering time control protein FCA OS=Arabidopsis... 0.03 OrthoFinder output from all 47 species
Tin_g10875 FCA transcription factor *(FCA/SSF) & original description: none 0.04 OrthoFinder output from all 47 species
Zm00001e009433_P002 FCA, Zm00001e009433 no description available(sp|b8bcz8|fca_orysi : 625.0) 0.02 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0003723 RNA binding IEA Interproscan
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Type GO Term Name Evidence Source
MF GO:0000166 nucleotide binding IEP HCCA
MF GO:0005524 ATP binding IEP HCCA
CC GO:0005667 transcription regulator complex IEP HCCA
MF GO:0017076 purine nucleotide binding IEP HCCA
MF GO:0030554 adenyl nucleotide binding IEP HCCA
MF GO:0032553 ribonucleotide binding IEP HCCA
MF GO:0032555 purine ribonucleotide binding IEP HCCA
MF GO:0032559 adenyl ribonucleotide binding IEP HCCA
MF GO:0035639 purine ribonucleoside triphosphate binding IEP HCCA
MF GO:0036094 small molecule binding IEP HCCA
MF GO:0043168 anion binding IEP HCCA
MF GO:0097367 carbohydrate derivative binding IEP HCCA
MF GO:1901265 nucleoside phosphate binding IEP HCCA
InterPro domains Description Start Stop
IPR000504 RRM_dom 351 421
IPR000504 RRM_dom 15 76
IPR000504 RRM_dom 103 168
No external refs found!