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  5. Cba_g03144

Cba_g03144 (HCC1)


Aliases : HCC1

Description : metallochaperone HCC of cytochrome c oxidase assembly & original description: none


Gene families : OG0002324 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0002324_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Cba_g03144
Cluster HCCA: Cluster_291

Target Alias Description ECC score Gene Family Method Actions
Aspi01Gene55664.t1 HCC1, Aspi01Gene55664 metallochaperone HCC of cytochrome c oxidase assembly &... 0.05 OrthoFinder output from all 47 species
Ceric.01G082300.1 HCC1, Ceric.01G082300 metallochaperone HCC of cytochrome c oxidase assembly &... 0.03 OrthoFinder output from all 47 species
Nbi_g13836 HCC1 metallochaperone HCC of cytochrome c oxidase assembly &... 0.03 OrthoFinder output from all 47 species
Sam_g09554 No alias metallochaperone HCC of cytochrome c oxidase assembly &... 0.03 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0003676 nucleic acid binding IEP HCCA
MF GO:0003723 RNA binding IEP HCCA
MF GO:0003993 acid phosphatase activity IEP HCCA
CC GO:0005634 nucleus IEP HCCA
CC GO:0005840 ribosome IEP HCCA
BP GO:0006364 rRNA processing IEP HCCA
BP GO:0006396 RNA processing IEP HCCA
MF GO:0008168 methyltransferase activity IEP HCCA
BP GO:0016072 rRNA metabolic process IEP HCCA
MF GO:0016741 transferase activity, transferring one-carbon groups IEP HCCA
MF GO:0016791 phosphatase activity IEP HCCA
MF GO:0019843 rRNA binding IEP HCCA
BP GO:0034470 ncRNA processing IEP HCCA
BP GO:0034641 cellular nitrogen compound metabolic process IEP HCCA
BP GO:0034660 ncRNA metabolic process IEP HCCA
MF GO:0042578 phosphoric ester hydrolase activity IEP HCCA
CC GO:0043226 organelle IEP HCCA
CC GO:0043229 intracellular organelle IEP HCCA
BP GO:0044238 primary metabolic process IEP HCCA
InterPro domains Description Start Stop
IPR003782 SCO1/SenC 175 309
No external refs found!