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  5. Cba_g03084

Cba_g03084


Description : not classified & original description: none


Gene families : OG0000445 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000445_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Cba_g03084
Cluster HCCA: Cluster_235

Target Alias Description ECC score Gene Family Method Actions
AT2G36950 No alias Heavy metal transport/detoxification superfamily protein 0.02 OrthoFinder output from all 47 species
Ala_g06633 FP3, ATFP3 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ala_g34485 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Azfi_s0102.g044607 FP3, ATFP3 not classified & original description: CDS=1-693 0.04 OrthoFinder output from all 47 species
Ceric.02G006100.1 FP3, ATFP3,... not classified & original description: pacid=50586048... 0.03 OrthoFinder output from all 47 species
Dac_g30809 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ehy_g05636 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ehy_g06436 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ehy_g23949 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ehy_g26181 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
GSVIVT01025734001 No alias Heavy metal-associated isoprenylated plant protein 5... 0.04 OrthoFinder output from all 47 species
LOC_Os04g50020.1 LOC_Os04g50020 Heavy metal-associated isoprenylated plant protein 4... 0.02 OrthoFinder output from all 47 species
MA_91779g0010 FP3, ATFP3 Heavy metal-associated isoprenylated plant protein 8... 0.03 OrthoFinder output from all 47 species
Ore_g28942 FP3, ATFP3 not classified & original description: none 0.02 OrthoFinder output from all 47 species
Pir_g44668 FP3, ATFP3 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Pir_g46183 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Sacu_v1.1_s0012.g005624 No alias not classified & original description: CDS=567-1340 0.02 OrthoFinder output from all 47 species
Sam_g20127 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Spa_g09528 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Spa_g15416 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Spa_g57327 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Tin_g44690 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Zm00001e040759_P004 FP3, ATFP3,... Heavy metal-associated isoprenylated plant protein 7... 0.02 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0046872 metal ion binding IEA Interproscan
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Type GO Term Name Evidence Source
MF GO:0003779 actin binding IEP HCCA
BP GO:0006396 RNA processing IEP HCCA
BP GO:0006397 mRNA processing IEP HCCA
BP GO:0006644 phospholipid metabolic process IEP HCCA
BP GO:0006650 glycerophospholipid metabolic process IEP HCCA
MF GO:0008092 cytoskeletal protein binding IEP HCCA
BP GO:0016071 mRNA metabolic process IEP HCCA
MF GO:0016307 phosphatidylinositol phosphate kinase activity IEP HCCA
MF GO:0016887 ATP hydrolysis activity IEP HCCA
BP GO:0044255 cellular lipid metabolic process IEP HCCA
BP GO:0046486 glycerolipid metabolic process IEP HCCA
BP GO:0046488 phosphatidylinositol metabolic process IEP HCCA
InterPro domains Description Start Stop
IPR006121 HMA_dom 15 71
IPR006121 HMA_dom 120 174
No external refs found!