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  5. Cba_g03016

Cba_g03016 (AtVHP1;1, AVP1, ATAVP3, AVP-3)


Aliases : AtVHP1;1, AVP1, ATAVP3, AVP-3

Description : not classified & original description: none


Gene families : OG0011496 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0011496_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Cba_g03016

Target Alias Description ECC score Gene Family Method Actions
Adi_g076380 AtVHP1;1, AVP1,... not classified & original description: none 0.04 OrthoFinder output from all 47 species
Als_g39997 AtVHP1;1, AVP1,... not classified & original description: none 0.08 OrthoFinder output from all 47 species
Len_g26105 AtVHP1;1, AVP1,... not classified & original description: none 0.03 OrthoFinder output from all 47 species
Lfl_g39730 AtVHP1;1, AVP1,... proton-translocating pyrophosphatase *(VHP1) & original... 0.03 OrthoFinder output from all 47 species
Pir_g50163 AtVHP1;1, AVP1,... not classified & original description: none 0.02 OrthoFinder output from all 47 species
Ppi_g47781 No alias not classified & original description: none 0.06 OrthoFinder output from all 47 species
Spa_g02558 AtVHP1;1, AVP1,... not classified & original description: none 0.05 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0004427 inorganic diphosphate phosphatase activity IEA Interproscan
MF GO:0009678 pyrophosphate hydrolysis-driven proton transmembrane transporter activity IEA Interproscan
CC GO:0016020 membrane IEA Interproscan
BP GO:1902600 proton transmembrane transport IEA Interproscan
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Type GO Term Name Evidence Source
MF GO:0004470 malic enzyme activity IEP HCCA
MF GO:0004471 malate dehydrogenase (decarboxylating) (NAD+) activity IEP HCCA
BP GO:0006996 organelle organization IEP HCCA
BP GO:0016043 cellular component organization IEP HCCA
MF GO:0016614 oxidoreductase activity, acting on CH-OH group of donors IEP HCCA
MF GO:0016615 malate dehydrogenase activity IEP HCCA
MF GO:0016616 oxidoreductase activity, acting on the CH-OH group of donors, NAD or NADP as acceptor IEP HCCA
MF GO:0016779 nucleotidyltransferase activity IEP HCCA
MF GO:0016788 hydrolase activity, acting on ester bonds IEP HCCA
BP GO:0032392 DNA geometric change IEP HCCA
BP GO:0032508 DNA duplex unwinding IEP HCCA
BP GO:0051276 chromosome organization IEP HCCA
BP GO:0071103 DNA conformation change IEP HCCA
BP GO:0071840 cellular component organization or biogenesis IEP HCCA
InterPro domains Description Start Stop
IPR004131 PPase-energised_H-pump 41 285
No external refs found!