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  5. Cba_g03006

Cba_g03006 (ATE1)


Aliases : ATE1

Description : not classified & original description: none


Gene families : OG0006470 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0006470_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Cba_g03006

Target Alias Description ECC score Gene Family Method Actions
Pir_g19927 ATE1 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Solyc04g005350.3.1 ATE1, Solyc04g005350 no hits & (original description: none) 0.02 OrthoFinder output from all 47 species
Spa_g01891 ATE1 not classified & original description: none 0.03 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0003723 RNA binding IEA Interproscan
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Type GO Term Name Evidence Source
BP GO:0000381 regulation of alternative mRNA splicing, via spliceosome IEP HCCA
BP GO:0006139 nucleobase-containing compound metabolic process IEP HCCA
BP GO:0006396 RNA processing IEP HCCA
BP GO:0006725 cellular aromatic compound metabolic process IEP HCCA
BP GO:0016070 RNA metabolic process IEP HCCA
BP GO:0034641 cellular nitrogen compound metabolic process IEP HCCA
BP GO:0043484 regulation of RNA splicing IEP HCCA
BP GO:0046483 heterocycle metabolic process IEP HCCA
BP GO:0048024 regulation of mRNA splicing, via spliceosome IEP HCCA
BP GO:0050684 regulation of mRNA processing IEP HCCA
BP GO:0090304 nucleic acid metabolic process IEP HCCA
BP GO:1901360 organic cyclic compound metabolic process IEP HCCA
BP GO:1903311 regulation of mRNA metabolic process IEP HCCA
InterPro domains Description Start Stop
IPR000504 RRM_dom 9 78
No external refs found!