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  5. Cba_g02437

Cba_g02437 (PMDH1)


Aliases : PMDH1

Description : peroxisomal NAD-dependent malate dehydrogenase & original description: none


Gene families : OG0000664 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000664_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Cba_g02437

Target Alias Description ECC score Gene Family Method Actions
AT5G09660 PMDH2 peroxisomal NAD-malate dehydrogenase 2 0.13 OrthoFinder output from all 47 species
Adi_g020369 PMDH1 peroxisomal NAD-dependent malate dehydrogenase &... 0.02 OrthoFinder output from all 47 species
Aev_g01101 PMDH1 peroxisomal NAD-dependent malate dehydrogenase &... 0.08 OrthoFinder output from all 47 species
Ala_g01385 PMDH1 peroxisomal NAD-dependent malate dehydrogenase &... 0.06 OrthoFinder output from all 47 species
Als_g06082 PMDH1 peroxisomal NAD-dependent malate dehydrogenase &... 0.1 OrthoFinder output from all 47 species
Aob_g07797 PMDH1 peroxisomal NAD-dependent malate dehydrogenase &... 0.04 OrthoFinder output from all 47 species
Aop_g00482 PMDH1 peroxisomal NAD-dependent malate dehydrogenase &... 0.1 OrthoFinder output from all 47 species
Aspi01Gene69164.t1 PMDH1, Aspi01Gene69164 not classified & original description: none 0.07 OrthoFinder output from all 47 species
Ceric.28G009700.1 PMDH1, Ceric.28G009700 peroxisomal NAD-dependent malate dehydrogenase &... 0.1 OrthoFinder output from all 47 species
Dac_g23577 PMDH1 peroxisomal NAD-dependent malate dehydrogenase &... 0.04 OrthoFinder output from all 47 species
Dcu_g01037 PMDH1 peroxisomal NAD-dependent malate dehydrogenase &... 0.11 OrthoFinder output from all 47 species
Dde_g06779 mMDH1 peroxisomal NAD-dependent malate dehydrogenase &... 0.02 OrthoFinder output from all 47 species
Dde_g20852 PMDH1 peroxisomal NAD-dependent malate dehydrogenase &... 0.1 OrthoFinder output from all 47 species
Ehy_g00867 PMDH1 peroxisomal NAD-dependent malate dehydrogenase &... 0.07 OrthoFinder output from all 47 species
GSVIVT01036965001 PMDH1 Lipid metabolism.lipid degradation.fatty acid... 0.11 OrthoFinder output from all 47 species
Gb_00793 PMDH1 peroxisomal NAD-dependent malate dehydrogenase 0.07 OrthoFinder output from all 47 species
LOC_Os03g56280.1 PMDH1, LOC_Os03g56280 peroxisomal NAD-dependent malate dehydrogenase 0.09 OrthoFinder output from all 47 species
LOC_Os07g43700.2 MDH, LOC_Os07g43700 malate dehydrogenase component of AAA-ATPase motor complex 0.05 OrthoFinder output from all 47 species
Lfl_g01023 PMDH1 peroxisomal NAD-dependent malate dehydrogenase &... 0.03 OrthoFinder output from all 47 species
MA_87937g0010 PMDH1 peroxisomal NAD-dependent malate dehydrogenase 0.1 OrthoFinder output from all 47 species
Mp2g08440.1 PMDH1 peroxisomal NAD-dependent malate dehydrogenase 0.15 OrthoFinder output from all 47 species
Msp_g06714 PMDH1 peroxisomal NAD-dependent malate dehydrogenase &... 0.11 OrthoFinder output from all 47 species
Nbi_g02729 PMDH1 peroxisomal NAD-dependent malate dehydrogenase &... 0.08 OrthoFinder output from all 47 species
Ore_g20188 PMDH1 peroxisomal NAD-dependent malate dehydrogenase &... 0.05 OrthoFinder output from all 47 species
Pir_g12090 PMDH1 peroxisomal NAD-dependent malate dehydrogenase &... 0.12 OrthoFinder output from all 47 species
Pnu_g00639 PMDH1 peroxisomal NAD-dependent malate dehydrogenase &... 0.05 OrthoFinder output from all 47 species
Ppi_g02813 PMDH1 peroxisomal NAD-dependent malate dehydrogenase &... 0.1 OrthoFinder output from all 47 species
Ppi_g61921 MDH malate dehydrogenase component of AAA-ATPase motor... 0.1 OrthoFinder output from all 47 species
Sam_g16454 No alias peroxisomal NAD-dependent malate dehydrogenase &... 0.06 OrthoFinder output from all 47 species
Smo270780 PMDH1 Lipid metabolism.lipid degradation.fatty acid... 0.03 OrthoFinder output from all 47 species
Solyc01g106480.4.1 PMDH1, Solyc01g106480 peroxisomal NAD-dependent malate dehydrogenase 0.07 OrthoFinder output from all 47 species
Solyc03g115990.3.1 MDH, Solyc03g115990 malate dehydrogenase component of AAA-ATPase motor complex 0.02 OrthoFinder output from all 47 species
Spa_g10807 PMDH1 peroxisomal NAD-dependent malate dehydrogenase &... 0.09 OrthoFinder output from all 47 species
Tin_g01665 PMDH1 peroxisomal NAD-dependent malate dehydrogenase &... 0.06 OrthoFinder output from all 47 species
Zm00001e005838_P001 PMDH1, Zm00001e005838 peroxisomal NAD-dependent malate dehydrogenase 0.11 OrthoFinder output from all 47 species
Zm00001e035622_P001 MDH, Zm00001e035622 Malate dehydrogenase, chloroplastic OS=Arabidopsis... 0.04 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0016491 oxidoreductase activity IEA Interproscan
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Type GO Term Name Evidence Source
MF GO:0004375 glycine dehydrogenase (decarboxylating) activity IEP HCCA
BP GO:0006520 amino acid metabolic process IEP HCCA
BP GO:0006544 glycine metabolic process IEP HCCA
BP GO:0006546 glycine catabolic process IEP HCCA
BP GO:0006820 monoatomic anion transport IEP HCCA
MF GO:0008942 nitrite reductase [NAD(P)H] activity IEP HCCA
BP GO:0009063 amino acid catabolic process IEP HCCA
BP GO:0009069 serine family amino acid metabolic process IEP HCCA
BP GO:0009071 serine family amino acid catabolic process IEP HCCA
BP GO:0016054 organic acid catabolic process IEP HCCA
MF GO:0016620 oxidoreductase activity, acting on the aldehyde or oxo group of donors, NAD or NADP as acceptor IEP HCCA
MF GO:0016638 oxidoreductase activity, acting on the CH-NH2 group of donors IEP HCCA
MF GO:0016642 oxidoreductase activity, acting on the CH-NH2 group of donors, disulfide as acceptor IEP HCCA
MF GO:0016661 oxidoreductase activity, acting on other nitrogenous compounds as donors IEP HCCA
MF GO:0016903 oxidoreductase activity, acting on the aldehyde or oxo group of donors IEP HCCA
BP GO:0044248 cellular catabolic process IEP HCCA
BP GO:0044282 small molecule catabolic process IEP HCCA
BP GO:0046395 carboxylic acid catabolic process IEP HCCA
MF GO:0046857 oxidoreductase activity, acting on other nitrogenous compounds as donors, with NAD or NADP as acceptor IEP HCCA
MF GO:0051287 NAD binding IEP HCCA
MF GO:0098809 nitrite reductase activity IEP HCCA
BP GO:1901565 organonitrogen compound catabolic process IEP HCCA
BP GO:1901605 alpha-amino acid metabolic process IEP HCCA
BP GO:1901606 alpha-amino acid catabolic process IEP HCCA
InterPro domains Description Start Stop
IPR022383 Lactate/malate_DH_C 191 354
IPR001236 Lactate/malate_DH_N 47 189
No external refs found!