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  5. Lfl_g30910

Lfl_g30910


Description : component *(uS10) of small ribosomal-subunit (SSU) proteome & original description: none


Gene families : OG0001982 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0001982_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Lfl_g30910
Cluster HCCA: Cluster_94

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00024p00105050 evm_27.TU.AmTr_v1... Protein biosynthesis.cytosolic ribosome.small subunit... 0.03 OrthoFinder output from all 47 species
AT3G45030 No alias Ribosomal protein S10p/S20e family protein 0.04 OrthoFinder output from all 47 species
AT3G47370 No alias Ribosomal protein S10p/S20e family protein 0.04 OrthoFinder output from all 47 species
AT5G62300 No alias Ribosomal protein S10p/S20e family protein 0.04 OrthoFinder output from all 47 species
Ala_g32242 No alias component *(uS10) of small ribosomal-subunit (SSU)... 0.07 OrthoFinder output from all 47 species
Ala_g39099 No alias component *(uS10) of small ribosomal-subunit (SSU)... 0.03 OrthoFinder output from all 47 species
Aob_g00267 No alias component *(uS10) of small ribosomal-subunit (SSU)... 0.03 OrthoFinder output from all 47 species
Azfi_s0104.g044711 No alias component *(uS10) of small ribosomal-subunit (SSU)... 0.03 OrthoFinder output from all 47 species
Ceric.35G056300.1 Ceric.35G056300 component *(uS10) of small ribosomal-subunit (SSU)... 0.05 OrthoFinder output from all 47 species
Cpa|evm.model.tig00000842.28 No alias Protein biosynthesis.cytosolic ribosome.small subunit... 0.04 OrthoFinder output from all 47 species
Cre16.g660150 No alias Protein biosynthesis.cytosolic ribosome.small subunit... 0.03 OrthoFinder output from all 47 species
Dcu_g24923 No alias component *(uS10) of small ribosomal-subunit (SSU)... 0.06 OrthoFinder output from all 47 species
GSVIVT01018553001 No alias Protein biosynthesis.cytosolic ribosome.small subunit... 0.05 OrthoFinder output from all 47 species
LOC_Os03g14530.1 LOC_Os03g14530 component RPS20 of SSU proteome 0.06 OrthoFinder output from all 47 species
LOC_Os10g08930.1 LOC_Os10g08930 component RPS20 of SSU proteome 0.04 OrthoFinder output from all 47 species
MA_10429759g0010 No alias component RPS20 of SSU proteome 0.04 OrthoFinder output from all 47 species
Mp2g09440.1 No alias component RPS20 of SSU proteome 0.05 OrthoFinder output from all 47 species
Mp3g07760.1 No alias component RPS20 of SSU proteome 0.02 OrthoFinder output from all 47 species
Msp_g24561 No alias component *(uS10) of small ribosomal-subunit (SSU)... 0.04 OrthoFinder output from all 47 species
Msp_g36291 No alias component *(uS10) of small ribosomal-subunit (SSU)... 0.03 OrthoFinder output from all 47 species
Nbi_g00057 No alias component *(uS10) of small ribosomal-subunit (SSU)... 0.04 OrthoFinder output from all 47 species
Pir_g45562 No alias component *(uS10) of small ribosomal-subunit (SSU)... 0.03 OrthoFinder output from all 47 species
Pir_g63796 No alias component *(uS10) of small ribosomal-subunit (SSU)... 0.04 OrthoFinder output from all 47 species
Pp3c1_21860V3.1 Pp3c1_21860 Ribosomal protein S10p/S20e family protein 0.03 OrthoFinder output from all 47 species
Sam_g23471 No alias component *(uS10) of small ribosomal-subunit (SSU)... 0.03 OrthoFinder output from all 47 species
Solyc01g096580.3.1 Solyc01g096580 component RPS20 of SSU proteome 0.05 OrthoFinder output from all 47 species
Tin_g26346 No alias component *(uS10) of small ribosomal-subunit (SSU)... 0.02 OrthoFinder output from all 47 species
Zm00001e001045_P001 Zm00001e001045 component RPS20 of SSU proteome 0.04 OrthoFinder output from all 47 species
Zm00001e036579_P001 Zm00001e036579 component RPS20 of SSU proteome 0.05 OrthoFinder output from all 47 species
Zm00001e038574_P001 Zm00001e038574 component RPS20 of SSU proteome 0.07 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0000166 nucleotide binding IEP HCCA
MF GO:0003924 GTPase activity IEP HCCA
MF GO:0005509 calcium ion binding IEP HCCA
MF GO:0005525 GTP binding IEP HCCA
MF GO:0016462 pyrophosphatase activity IEP HCCA
MF GO:0016787 hydrolase activity IEP HCCA
MF GO:0016817 hydrolase activity, acting on acid anhydrides IEP HCCA
MF GO:0016818 hydrolase activity, acting on acid anhydrides, in phosphorus-containing anhydrides IEP HCCA
MF GO:0017076 purine nucleotide binding IEP HCCA
MF GO:0017111 ribonucleoside triphosphate phosphatase activity IEP HCCA
MF GO:0019001 guanyl nucleotide binding IEP HCCA
MF GO:0032553 ribonucleotide binding IEP HCCA
MF GO:0032555 purine ribonucleotide binding IEP HCCA
MF GO:0032561 guanyl ribonucleotide binding IEP HCCA
MF GO:0035639 purine ribonucleoside triphosphate binding IEP HCCA
MF GO:0043167 ion binding IEP HCCA
MF GO:0043168 anion binding IEP HCCA
MF GO:0097367 carbohydrate derivative binding IEP HCCA
MF GO:1901265 nucleoside phosphate binding IEP HCCA
InterPro domains Description Start Stop
IPR027486 Ribosomal_S10_dom 70 164
No external refs found!